Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
KIEVYAQPDCPPCVIVKEFLKHNNVAYEEFDVKKDAAARNRLLYDYDSYSTPTVVIDGEV
VAGFQIEKLQQLLN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3zit-a1-m1-cB 78 74 1.0000 0.9487 1.0000 8.61e-51 3zit-a1-m1-cA_3zit-a1-m1-cB
2 3zit-a1-m1-cA 74 74 1.0000 1.0000 1.0000 1.16e-50 3zit-a1-m1-cA_3zit-a1-m1-cB
3 7c12-a1-m1-cD 73 71 0.4054 0.4110 0.4225 5.19e-13 7c12-a1-m1-cA_7c12-a1-m1-cD, 7c12-a1-m1-cB_7c12-a1-m1-cD
4 7c12-a1-m1-cB 73 71 0.4054 0.4110 0.4225 5.19e-13 7c12-a1-m1-cB_7c12-a1-m1-cD
5 7c12-a1-m1-cA 73 71 0.4054 0.4110 0.4225 5.19e-13 7c12-a1-m1-cA_7c12-a1-m1-cD
6 7c13-a1-m2-cC 71 69 0.3919 0.4085 0.4203 2.33e-12 7c13-a1-m1-cB_7c13-a1-m2-cC, 7c13-a1-m2-cB_7c13-a1-m2-cC
7 7c13-a1-m2-cB 71 69 0.3919 0.4085 0.4203 2.33e-12 7c13-a1-m1-cB_7c13-a1-m2-cB, 7c13-a1-m2-cB_7c13-a1-m2-cC
8 7c13-a1-m1-cB 71 69 0.3919 0.4085 0.4203 2.33e-12 7c13-a1-m1-cB_7c13-a1-m2-cB, 7c13-a1-m1-cB_7c13-a1-m2-cC
9 1r7h-a1-m1-cB 74 72 0.3108 0.3108 0.3194 1.30e-07 1r7h-a1-m1-cA_1r7h-a1-m1-cB
10 1r7h-a1-m1-cA 74 72 0.3108 0.3108 0.3194 1.30e-07 1r7h-a1-m1-cA_1r7h-a1-m1-cB
11 4k8m-a1-m2-cA 84 71 0.2432 0.2143 0.2535 1.39e-04 4k8m-a1-m1-cA_4k8m-a1-m2-cA
12 4k8m-a1-m1-cA 84 71 0.2432 0.2143 0.2535 1.39e-04 4k8m-a1-m1-cA_4k8m-a1-m2-cA
13 1nm3-a1-m2-cA 230 62 0.2162 0.0696 0.2581 0.017 1nm3-a1-m2-cA_1nm3-a1-m2-cB
14 1nm3-a1-m1-cA 230 62 0.2162 0.0696 0.2581 0.017 1nm3-a1-m1-cA_1nm3-a1-m2-cB
15 1nm3-a1-m2-cB 232 62 0.2162 0.0690 0.2581 0.017 1nm3-a1-m1-cA_1nm3-a1-m2-cB, 1nm3-a1-m2-cA_1nm3-a1-m2-cB
16 2mzc-a1-m1-cB 92 60 0.1892 0.1522 0.2333 0.12 2mzc-a1-m1-cA_2mzc-a1-m1-cB
17 2mzc-a1-m1-cA 92 60 0.1892 0.1522 0.2333 0.12 2mzc-a1-m1-cA_2mzc-a1-m1-cB
18 7pwe-a1-m1-cB 191 78 0.2973 0.1152 0.2821 0.33 7pwe-a1-m1-cB_7pwe-a1-m1-cA
19 7pwe-a1-m1-cA 192 78 0.2973 0.1146 0.2821 0.36 7pwe-a1-m1-cB_7pwe-a1-m1-cA
20 4mnn-a2-m2-cA 165 64 0.2297 0.1030 0.2656 0.91 4mnn-a2-m1-cA_4mnn-a2-m2-cA
21 4mnn-a2-m1-cA 165 64 0.2297 0.1030 0.2656 0.91 4mnn-a2-m1-cA_4mnn-a2-m2-cA
22 3gv1-a2-m1-cB 134 47 0.1757 0.0970 0.2766 1.4 3gv1-a2-m1-cA_3gv1-a2-m1-cB
23 3gv1-a2-m1-cA 134 47 0.1757 0.0970 0.2766 1.4 3gv1-a2-m1-cA_3gv1-a2-m1-cB
24 3r1m-a1-m8-cA 356 39 0.2027 0.0421 0.3846 3.1 3r1m-a1-m2-cA_3r1m-a1-m8-cA, 3r1m-a1-m4-cA_3r1m-a1-m8-cA, 3r1m-a1-m6-cA_3r1m-a1-m8-cA
25 3r1m-a1-m6-cA 356 39 0.2027 0.0421 0.3846 3.1 3r1m-a1-m6-cA_3r1m-a1-m8-cA
26 3r1m-a1-m4-cA 356 39 0.2027 0.0421 0.3846 3.1 3r1m-a1-m4-cA_3r1m-a1-m8-cA
27 3r1m-a1-m2-cA 356 39 0.2027 0.0421 0.3846 3.1 3r1m-a1-m2-cA_3r1m-a1-m8-cA
28 4yh2-a1-m1-cA 221 65 0.2703 0.0905 0.3077 5.0 4yh2-a1-m1-cC_4yh2-a1-m1-cA
29 4yh2-a1-m1-cC 220 65 0.2703 0.0909 0.3077 5.1 4yh2-a1-m1-cC_4yh2-a1-m1-cA
30 1ygz-a4-m7-cD 168 49 0.2568 0.1131 0.3878 5.2 1ygz-a4-m1-cC_1ygz-a4-m7-cD, 1ygz-a4-m7-cC_1ygz-a4-m7-cD
31 1ygz-a4-m7-cC 168 49 0.2568 0.1131 0.3878 5.2 1ygz-a4-m7-cC_1ygz-a4-m7-cD
32 1ygz-a4-m1-cC 168 49 0.2568 0.1131 0.3878 5.2 1ygz-a4-m1-cC_1ygz-a4-m7-cD
33 1ygz-a3-m5-cA 168 49 0.2568 0.1131 0.3878 5.2 1ygz-a3-m4-cA_1ygz-a3-m5-cA
34 1ygz-a3-m4-cA 168 49 0.2568 0.1131 0.3878 5.2 1ygz-a3-m4-cA_1ygz-a3-m5-cA
35 1ygz-a1-m1-cE 168 49 0.2568 0.1131 0.3878 5.2 1ygz-a1-m1-cD_1ygz-a1-m1-cE
36 1ygz-a1-m1-cD 168 49 0.2568 0.1131 0.3878 5.2 1ygz-a1-m1-cD_1ygz-a1-m1-cE
37 5lf5-a1-m2-cA 484 21 0.1351 0.0207 0.4762 8.2 5lf5-a1-m1-cA_5lf5-a1-m2-cA
38 5lf5-a1-m1-cA 484 21 0.1351 0.0207 0.4762 8.2 5lf5-a1-m1-cA_5lf5-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600