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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=56)
KIFQMAYGIGASIVILGALFKILHWEIDFGGFKLGGGFLLAFGLITEAIIFFISAF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7saz-a1-m1-cE 56 56 1.0000 1.0000 1.0000 1.08e-31 7saz-a1-m1-cE_7saz-a1-m1-cF
2 7saz-a1-m1-cF 57 56 1.0000 0.9825 1.0000 1.29e-31 7saz-a1-m1-cE_7saz-a1-m1-cF
3 6ys8-a1-m1-cG 60 56 0.5357 0.5000 0.5357 9.58e-13 6ys8-a1-m1-cF_6ys8-a1-m1-cG
4 6ys8-a1-m1-cF 60 56 0.5357 0.5000 0.5357 9.58e-13 6ys8-a1-m1-cF_6ys8-a1-m1-cG
5 7sau-a1-m1-cE 72 50 0.5357 0.4167 0.6000 4.47e-11 7sau-a1-m1-cF_7sau-a1-m1-cE
6 7sau-a1-m1-cF 71 50 0.5357 0.4225 0.6000 4.51e-11 7sau-a1-m1-cF_7sau-a1-m1-cE
7 7sat-a1-m1-cF 77 56 0.4286 0.3117 0.4286 5.54e-07 7sat-a1-m1-cF_7sat-a1-m1-cE
8 7sat-a1-m1-cE 80 56 0.4286 0.3000 0.4286 5.90e-07 7sat-a1-m1-cF_7sat-a1-m1-cE
9 7sax-a1-m1-cC 60 47 0.3571 0.3333 0.4255 4.28e-04 7sax-a1-m1-cG_7sax-a1-m1-cC
10 7sax-a1-m1-cG 50 47 0.3571 0.4000 0.4255 4.47e-04 7sax-a1-m1-cG_7sax-a1-m1-cC
11 4q3o-a4-m1-cH 316 51 0.3036 0.0538 0.3333 2.1 4q3o-a4-m1-cE_4q3o-a4-m1-cH
12 4q3o-a4-m1-cE 316 51 0.3036 0.0538 0.3333 2.1 4q3o-a4-m1-cE_4q3o-a4-m1-cH
13 1oy5-a2-m2-cB 218 25 0.1964 0.0505 0.4400 7.2 1oy5-a2-m1-cB_1oy5-a2-m2-cB
14 1oy5-a2-m1-cB 218 25 0.1964 0.0505 0.4400 7.2 1oy5-a2-m1-cB_1oy5-a2-m2-cB
15 5f2h-a1-m1-cA 297 30 0.2321 0.0438 0.4333 8.0 5f2h-a1-m1-cA_5f2h-a1-m1-cB
16 5f2h-a1-m1-cB 301 30 0.2321 0.0432 0.4333 8.0 5f2h-a1-m1-cA_5f2h-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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