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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
KIPSIATGLVGALLLLLVVALGIGLFIRRRHIVRKRTLRRLLQERELVEPLTPSGEKLWS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2m20-a1-m1-cB 60 60 1.0000 1.0000 1.0000 4.07e-35 2m20-a1-m1-cA_2m20-a1-m1-cB
2 2m20-a1-m1-cA 60 60 1.0000 1.0000 1.0000 4.07e-35 2m20-a1-m1-cA_2m20-a1-m1-cB
3 3gop-a1-m2-cA 300 22 0.3667 0.0733 1.0000 5.71e-08 3gop-a1-m1-cA_3gop-a1-m2-cA
4 3gop-a1-m1-cA 300 22 0.3667 0.0733 1.0000 5.71e-08 3gop-a1-m1-cA_3gop-a1-m2-cA
5 5lv6-a1-m1-cB 44 36 0.5667 0.7727 0.9444 7.01e-07 5lv6-a1-m1-cA_5lv6-a1-m1-cB
6 5lv6-a1-m1-cA 44 36 0.5667 0.7727 0.9444 7.01e-07 5lv6-a1-m1-cA_5lv6-a1-m1-cB
7 2m0b-a1-m1-cB 44 36 0.5667 0.7727 0.9444 7.01e-07 2m0b-a1-m1-cA_2m0b-a1-m1-cB
8 2m0b-a1-m1-cA 44 36 0.5667 0.7727 0.9444 7.01e-07 2m0b-a1-m1-cA_2m0b-a1-m1-cB
9 2n2a-a1-m1-cB 58 27 0.3000 0.3103 0.6667 1.38e-04 2n2a-a1-m1-cA_2n2a-a1-m1-cB
10 2n2a-a1-m1-cA 58 27 0.3000 0.3103 0.6667 1.38e-04 2n2a-a1-m1-cA_2n2a-a1-m1-cB
11 2lcx-a1-m1-cB 44 37 0.2333 0.3182 0.3784 5.14e-04 2lcx-a1-m1-cA_2lcx-a1-m1-cB
12 2lcx-a1-m1-cA 44 37 0.2333 0.3182 0.3784 5.14e-04 2lcx-a1-m1-cA_2lcx-a1-m1-cB
13 4d0m-a3-m1-cc 470 42 0.2667 0.0340 0.3810 0.50 4d0m-a3-m1-cW_4d0m-a3-m1-cc
14 4d0m-a3-m1-cW 470 42 0.2667 0.0340 0.3810 0.50 4d0m-a3-m1-cW_4d0m-a3-m1-cc
15 6dbb-a3-m3-cC 502 27 0.2333 0.0279 0.5185 0.54 6dbb-a3-m1-cC_6dbb-a3-m3-cC
16 6dbb-a3-m1-cC 502 27 0.2333 0.0279 0.5185 0.54 6dbb-a3-m1-cC_6dbb-a3-m3-cC
17 7f6w-a1-m2-cA 506 28 0.2000 0.0237 0.4286 1.8 7f6w-a1-m1-cA_7f6w-a1-m2-cA
18 7f6w-a1-m1-cA 506 28 0.2000 0.0237 0.4286 1.8 7f6w-a1-m1-cA_7f6w-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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