HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=98)
KKIEIFDPACCPTGLCGTNINPELRIAVVIESLKKQGIIVTRHNLRDEPQVYVSNKTVND
FLQKHGADALPITLVDGEIAVSQTYPTTKQSEWTGVNL

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	3ktb-a1-m1-cA	102	98	1.0000	0.9608	1.0000	4.01e-70	3ktb-a1-m4-cC_3ktb-a1-m1-cA
2	3ktb-a2-m1-cD	100	98	1.0000	0.9800	1.0000	4.84e-70	3ktb-a2-m1-cB_3ktb-a2-m1-cD, 3ktb-a2-m1-cC_3ktb-a2-m1-cD
3	3ktb-a2-m1-cC	100	98	1.0000	0.9800	1.0000	4.84e-70	3ktb-a2-m1-cC_3ktb-a2-m1-cD
4	3ktb-a1-m4-cD	100	98	1.0000	0.9800	1.0000	4.84e-70	3ktb-a1-m2-cD_3ktb-a1-m4-cD
5	3ktb-a1-m4-cC	100	98	1.0000	0.9800	1.0000	4.84e-70	3ktb-a1-m4-cC_3ktb-a1-m1-cA
6	3ktb-a1-m2-cD	100	98	1.0000	0.9800	1.0000	4.84e-70	3ktb-a1-m2-cD_3ktb-a1-m4-cD
7	3ktb-a2-m1-cB	98	98	1.0000	1.0000	1.0000	5.60e-70	3ktb-a2-m1-cB_3ktb-a2-m1-cD
8	3kgk-a1-m1-cA	92	99	0.2959	0.3152	0.2929	1.72e-12	3kgk-a1-m1-cA_3kgk-a1-m1-cB
9	3kgk-a1-m1-cB	98	99	0.3061	0.3061	0.3030	2.33e-12	3kgk-a1-m1-cA_3kgk-a1-m1-cB
10	3wwm-a1-m2-cA	269	38	0.1327	0.0483	0.3421	0.75	3wwm-a1-m1-cA_3wwm-a1-m2-cA
11	3wwm-a1-m1-cA	269	38	0.1327	0.0483	0.3421	0.75	3wwm-a1-m1-cA_3wwm-a1-m2-cA
12	2o8v-a1-m2-cA	229	41	0.1429	0.0611	0.3415	1.3	2o8v-a1-m1-cA_2o8v-a1-m2-cA
13	2o8v-a1-m1-cA	229	41	0.1429	0.0611	0.3415	1.3	2o8v-a1-m1-cA_2o8v-a1-m2-cA
14	2buf-a1-m1-cF	291	53	0.1531	0.0515	0.2830	1.5	2buf-a1-m1-cF_2buf-a1-m1-cD
15	2buf-a1-m1-cD	294	55	0.1531	0.0510	0.2727	2.2	2buf-a1-m1-cF_2buf-a1-m1-cD
16	2buf-a2-m1-cI	288	51	0.1429	0.0486	0.2745	2.5	2buf-a2-m1-cJ_2buf-a2-m1-cI
17	1cru-a1-m1-cA	448	25	0.1122	0.0246	0.4400	4.3	1cru-a1-m1-cA_1cru-a1-m1-cB
18	1cru-a1-m1-cB	452	25	0.1122	0.0243	0.4400	4.4	1cru-a1-m1-cA_1cru-a1-m1-cB
19	1mum-a1-m2-cB	289	47	0.1531	0.0519	0.3191	4.5	1mum-a1-m1-cA_1mum-a1-m2-cB, 1mum-a1-m1-cB_1mum-a1-m2-cB
20	1mum-a1-m1-cB	289	47	0.1531	0.0519	0.3191	4.5	1mum-a1-m1-cB_1mum-a1-m2-cB
21	1mum-a1-m1-cA	289	47	0.1531	0.0519	0.3191	4.5	1mum-a1-m1-cA_1mum-a1-m2-cB
22	1oqf-a1-m2-cB	290	47	0.1531	0.0517	0.3191	4.5	1oqf-a1-m2-cA_1oqf-a1-m2-cB
23	1oqf-a1-m2-cA	290	47	0.1531	0.0517	0.3191	4.5	1oqf-a1-m2-cA_1oqf-a1-m2-cB
24	6vpu-a12-m1-cD	230	41	0.1531	0.0652	0.3659	4.7	6vpu-a12-m1-cE_6vpu-a12-m1-cD
25	6vpu-a12-m1-cE	222	41	0.1531	0.0676	0.3659	4.8	6vpu-a12-m1-cE_6vpu-a12-m1-cD
26	5w48-a1-m1-cB	448	55	0.1531	0.0335	0.2727	7.0	5w48-a1-m1-cB_5w48-a1-m1-cA
27	5w48-a1-m1-cA	452	55	0.1531	0.0332	0.2727	7.0	5w48-a1-m1-cB_5w48-a1-m1-cA
28	3g23-a1-m1-cB	264	28	0.1224	0.0455	0.4286	9.3	3g23-a1-m1-cA_3g23-a1-m1-cB
29	3g23-a1-m1-cA	264	28	0.1224	0.0455	0.4286	9.3	3g23-a1-m1-cA_3g23-a1-m1-cB

[Back]

Reference:
Jacob Schwartz et al.