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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=57)
KKIPLSKYLEEHGTQSALAAALGVNQSAISQVRAGRSIEITLYEDGRVEANEIRPIP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2pij-a1-m1-cB 58 57 1.0000 0.9828 1.0000 3.46e-36 2pij-a1-m1-cA_2pij-a1-m1-cB
2 2pij-a1-m1-cA 57 57 1.0000 1.0000 1.0000 4.20e-36 2pij-a1-m1-cA_2pij-a1-m1-cB
3 3bd1-a2-m1-cB 63 53 0.4211 0.3810 0.4528 1.72e-05 3bd1-a2-m1-cB_3bd1-a2-m1-cA
4 3bd1-a2-m1-cC 64 53 0.4211 0.3750 0.4528 1.93e-05 3bd1-a2-m1-cC_3bd1-a2-m1-cA
5 3bd1-a2-m1-cA 65 53 0.4211 0.3692 0.4528 2.18e-05 3bd1-a2-m1-cB_3bd1-a2-m1-cA, 3bd1-a2-m1-cC_3bd1-a2-m1-cA
6 3qdk-a2-m1-cD 554 41 0.2807 0.0289 0.3902 1.2 3qdk-a2-m1-cC_3qdk-a2-m1-cD
7 3qdk-a2-m1-cC 549 41 0.2807 0.0291 0.3902 1.2 3qdk-a2-m1-cC_3qdk-a2-m1-cD
8 7laf-a1-m1-cA 663 32 0.1930 0.0166 0.3438 2.9 7laf-a1-m1-cB_7laf-a1-m1-cA
9 4nre-a2-m6-cA 675 32 0.1930 0.0163 0.3438 2.9 4nre-a2-m2-cA_4nre-a2-m6-cA, 4nre-a2-m5-cA_4nre-a2-m6-cA
10 4nre-a2-m5-cA 675 32 0.1930 0.0163 0.3438 2.9 4nre-a2-m5-cA_4nre-a2-m6-cA
11 4nre-a2-m2-cA 675 32 0.1930 0.0163 0.3438 2.9 4nre-a2-m2-cA_4nre-a2-m6-cA
12 7laf-a1-m1-cB 655 32 0.1930 0.0168 0.3438 2.9 7laf-a1-m1-cB_7laf-a1-m1-cA
13 8fhj-a1-m1-cB 531 46 0.2281 0.0245 0.2826 3.2 8fhj-a1-m1-cA_8fhj-a1-m1-cB, 8fhj-a1-m1-cB_8fhj-a1-m1-cC
14 8fhj-a1-m1-cA 531 46 0.2281 0.0245 0.2826 3.2 8fhj-a1-m1-cA_8fhj-a1-m1-cB
15 8fhj-a1-m1-cC 532 46 0.2281 0.0244 0.2826 3.2 8fhj-a1-m1-cB_8fhj-a1-m1-cC
16 2ao9-a1-m2-cE 115 26 0.1579 0.0783 0.3462 4.8 2ao9-a1-m2-cE_2ao9-a1-m1-cA
17 3o6r-a1-m1-cB 256 14 0.1404 0.0312 0.5714 5.7 3o6r-a1-m1-cA_3o6r-a1-m1-cB
18 3o6r-a1-m1-cA 256 14 0.1404 0.0312 0.5714 5.7 3o6r-a1-m1-cA_3o6r-a1-m1-cB
19 1r23-a1-m1-cB 97 32 0.2456 0.1443 0.4375 7.8 1r23-a1-m1-cB_1r23-a1-m1-cA
20 1j05-a3-m2-cL 111 27 0.1930 0.0991 0.4074 8.7 1j05-a3-m2-cL_1j05-a3-m1-cA
21 1j05-a3-m1-cA 111 27 0.1930 0.0991 0.4074 8.7 1j05-a3-m2-cL_1j05-a3-m1-cA
22 1r23-a1-m1-cA 104 32 0.2456 0.1346 0.4375 8.8 1r23-a1-m1-cB_1r23-a1-m1-cA
23 1moe-a2-m2-cB 240 27 0.1930 0.0458 0.4074 8.9 1moe-a2-m1-cA_1moe-a2-m2-cB, 1moe-a2-m2-cA_1moe-a2-m2-cB
24 1moe-a2-m2-cA 240 27 0.1930 0.0458 0.4074 8.9 1moe-a2-m1-cA_1moe-a2-m2-cA, 1moe-a2-m2-cA_1moe-a2-m2-cB
25 1moe-a2-m1-cA 240 27 0.1930 0.0458 0.4074 8.9 1moe-a2-m1-cA_1moe-a2-m2-cA, 1moe-a2-m1-cA_1moe-a2-m2-cB

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Reference:
Jacob Schwartz et al.

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