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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
KKLQLMLRQANDQLEKTMKDKQELEDFIKQSSEDSSHQISALVLRAQASEILLEELQQGL
SQAKRDVQEQMAVLM

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1x79-a1-m1-cB 90 75 1.0000 0.8333 1.0000 2.15e-46 1x79-a1-m1-cC_1x79-a1-m1-cB
2 4n3z-a1-m1-cC 83 75 1.0000 0.9036 1.0000 2.28e-46 4n3z-a1-m1-cB_4n3z-a1-m1-cC
3 4q9u-a1-m1-cC 83 75 1.0000 0.9036 1.0000 2.30e-46 4q9u-a1-m1-cC_4q9u-a1-m1-cG, 4q9u-a1-m1-cH_4q9u-a1-m1-cC
4 4n3y-a1-m1-cC 83 75 1.0000 0.9036 1.0000 2.30e-46 4n3y-a1-m1-cB_4n3y-a1-m1-cC
5 4n3y-a1-m1-cB 83 75 1.0000 0.9036 1.0000 2.30e-46 4n3y-a1-m1-cB_4n3y-a1-m1-cC
6 4q9u-a1-m1-cG 84 75 1.0000 0.8929 1.0000 2.32e-46 4q9u-a1-m1-cC_4q9u-a1-m1-cG, 4q9u-a1-m1-cH_4q9u-a1-m1-cG
7 4q9u-a1-m1-cH 82 75 1.0000 0.9146 1.0000 2.33e-46 4q9u-a1-m1-cD_4q9u-a1-m1-cH, 4q9u-a1-m1-cH_4q9u-a1-m1-cC, 4q9u-a1-m1-cH_4q9u-a1-m1-cG
8 4n3z-a1-m1-cB 82 75 1.0000 0.9146 1.0000 2.33e-46 4n3z-a1-m1-cB_4n3z-a1-m1-cC
9 1x79-a1-m1-cC 88 75 1.0000 0.8523 1.0000 2.39e-46 1x79-a1-m1-cC_1x79-a1-m1-cB
10 4q9u-a1-m1-cD 75 75 1.0000 1.0000 1.0000 2.40e-46 4q9u-a1-m1-cD_4q9u-a1-m1-cH
11 2nnw-a2-m3-cC 350 38 0.1333 0.0286 0.2632 5.1 2nnw-a2-m1-cC_2nnw-a2-m3-cC
12 2nnw-a2-m1-cC 350 38 0.1333 0.0286 0.2632 5.1 2nnw-a2-m1-cC_2nnw-a2-m3-cC
13 4by9-a1-m1-cL 366 38 0.1333 0.0273 0.2632 5.5 4by9-a1-m1-cI_4by9-a1-m1-cL
14 4by9-a1-m1-cI 366 38 0.1333 0.0273 0.2632 5.5 4by9-a1-m1-cC_4by9-a1-m1-cI, 4by9-a1-m1-cI_4by9-a1-m1-cL
15 4by9-a1-m1-cC 366 38 0.1333 0.0273 0.2632 5.5 4by9-a1-m1-cC_4by9-a1-m1-cI
16 4wik-a1-m1-cA 228 45 0.2267 0.0746 0.3778 6.4 4wik-a1-m1-cB_4wik-a1-m1-cA
17 4wik-a1-m1-cB 225 45 0.2267 0.0756 0.3778 6.5 4wik-a1-m1-cB_4wik-a1-m1-cA
18 1coj-a1-m4-cA 211 19 0.1333 0.0474 0.5263 8.7 1coj-a1-m1-cA_1coj-a1-m4-cA, 1coj-a1-m2-cA_1coj-a1-m4-cA, 1coj-a1-m3-cA_1coj-a1-m4-cA
19 1coj-a1-m3-cA 211 19 0.1333 0.0474 0.5263 8.7 1coj-a1-m3-cA_1coj-a1-m4-cA
20 1coj-a1-m2-cA 211 19 0.1333 0.0474 0.5263 8.7 1coj-a1-m2-cA_1coj-a1-m4-cA
21 1coj-a1-m1-cA 211 19 0.1333 0.0474 0.5263 8.7 1coj-a1-m1-cA_1coj-a1-m4-cA
22 7dft-a1-m1-cG 183 47 0.2000 0.0820 0.3191 9.9 7dft-a1-m1-cA_7dft-a1-m1-cG

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Reference:
Jacob Schwartz et al.

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