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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
KKNGYAVDSSGKVAECLFNNYCNNECTKVYYADKGYCCLLKCYCFGLADDKPVLDIWDST
KNYCDVQIIDLS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1t0z-a9-m5-cA 72 72 1.0000 1.0000 1.0000 2.11e-47 1t0z-a9-m1-cA_1t0z-a9-m5-cA
2 1t0z-a9-m1-cA 72 72 1.0000 1.0000 1.0000 2.11e-47 1t0z-a9-m1-cA_1t0z-a9-m5-cA
3 1t0z-a8-m3-cB 72 72 1.0000 1.0000 1.0000 2.11e-47 1t0z-a8-m1-cA_1t0z-a8-m3-cB
4 1t0z-a8-m1-cA 72 72 1.0000 1.0000 1.0000 2.11e-47 1t0z-a8-m1-cA_1t0z-a8-m3-cB
5 1t0z-a7-m3-cB 72 72 1.0000 1.0000 1.0000 2.11e-47 1t0z-a7-m3-cA_1t0z-a7-m3-cB
6 1t0z-a7-m3-cA 72 72 1.0000 1.0000 1.0000 2.11e-47 1t0z-a7-m3-cA_1t0z-a7-m3-cB
7 1bcg-a1-m2-cA 72 72 0.5833 0.5833 0.5833 3.42e-23 1bcg-a1-m1-cA_1bcg-a1-m2-cA
8 1bcg-a1-m1-cA 72 72 0.5833 0.5833 0.5833 3.42e-23 1bcg-a1-m1-cA_1bcg-a1-m2-cA
9 1kv0-a1-m1-cB 66 57 0.2917 0.3182 0.3684 0.030 1kv0-a1-m1-cA_1kv0-a1-m1-cB
10 1kv0-a1-m1-cA 66 57 0.2917 0.3182 0.3684 0.030 1kv0-a1-m1-cA_1kv0-a1-m1-cB
11 2yeo-a1-m3-cA 65 57 0.2778 0.3077 0.3509 0.031 2yeo-a1-m2-cA_2yeo-a1-m3-cA
12 2yeo-a1-m2-cA 65 57 0.2778 0.3077 0.3509 0.031 2yeo-a1-m2-cA_2yeo-a1-m3-cA
13 1djt-a1-m1-cB 64 57 0.2778 0.3125 0.3509 0.048 1djt-a1-m1-cA_1djt-a1-m1-cB
14 1djt-a1-m1-cA 64 57 0.2778 0.3125 0.3509 0.048 1djt-a1-m1-cA_1djt-a1-m1-cB
15 6gp3-a1-m1-cB 313 46 0.1528 0.0351 0.2391 1.2 6gp3-a1-m1-cB_6gp3-a1-m1-cA
16 6gp3-a1-m1-cA 318 46 0.1528 0.0346 0.2391 1.2 6gp3-a1-m1-cB_6gp3-a1-m1-cA
17 3gb0-a1-m2-cA 363 14 0.1389 0.0275 0.7143 9.2 3gb0-a1-m1-cA_3gb0-a1-m2-cA
18 3gb0-a1-m1-cA 363 14 0.1389 0.0275 0.7143 9.2 3gb0-a1-m1-cA_3gb0-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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