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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
KKNGYPLDRNGKTTCSGVNAIAPHYCNSECTKVYYAESGYCCWGACYCFGLEDDKPIGPM
KDITKKYCDVQI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1bcg-a1-m2-cA 72 72 1.0000 1.0000 1.0000 1.74e-49 1bcg-a1-m1-cA_1bcg-a1-m2-cA
2 1bcg-a1-m1-cA 72 72 1.0000 1.0000 1.0000 1.74e-49 1bcg-a1-m1-cA_1bcg-a1-m2-cA
3 1t0z-a9-m5-cA 72 72 0.5833 0.5833 0.5833 3.42e-23 1t0z-a9-m1-cA_1t0z-a9-m5-cA
4 1t0z-a9-m1-cA 72 72 0.5833 0.5833 0.5833 3.42e-23 1t0z-a9-m1-cA_1t0z-a9-m5-cA
5 1t0z-a8-m3-cB 72 72 0.5833 0.5833 0.5833 3.42e-23 1t0z-a8-m1-cA_1t0z-a8-m3-cB
6 1t0z-a8-m1-cA 72 72 0.5833 0.5833 0.5833 3.42e-23 1t0z-a8-m1-cA_1t0z-a8-m3-cB
7 1t0z-a7-m3-cB 72 72 0.5833 0.5833 0.5833 3.42e-23 1t0z-a7-m3-cA_1t0z-a7-m3-cB
8 1t0z-a7-m3-cA 72 72 0.5833 0.5833 0.5833 3.42e-23 1t0z-a7-m3-cA_1t0z-a7-m3-cB
9 2yeo-a1-m3-cA 65 38 0.2639 0.2923 0.5000 0.016 2yeo-a1-m2-cA_2yeo-a1-m3-cA
10 2yeo-a1-m2-cA 65 38 0.2639 0.2923 0.5000 0.016 2yeo-a1-m2-cA_2yeo-a1-m3-cA
11 1qg3-a1-m1-cA 195 60 0.2222 0.0821 0.2667 0.25 1qg3-a1-m2-cB_1qg3-a1-m1-cA
12 1qg3-a1-m2-cB 193 60 0.2222 0.0829 0.2667 0.26 1qg3-a1-m2-cB_1qg3-a1-m1-cA
13 1kv0-a1-m1-cB 66 38 0.2361 0.2576 0.4474 7.8 1kv0-a1-m1-cA_1kv0-a1-m1-cB
14 1kv0-a1-m1-cA 66 38 0.2361 0.2576 0.4474 7.8 1kv0-a1-m1-cA_1kv0-a1-m1-cB
15 2qdr-a1-m4-cA 280 27 0.1667 0.0429 0.4444 9.8 2qdr-a1-m4-cB_2qdr-a1-m4-cA
16 2qdr-a1-m3-cA 280 27 0.1667 0.0429 0.4444 9.8 2qdr-a1-m4-cB_2qdr-a1-m3-cA

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Reference:
Jacob Schwartz et al.

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