Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
KKNRIQVSNTKKPLFFYVNLAKRYQQYNDVELSALGAIATVVTVTEILKNNGFAVEKKIT
SIVDIKPVQKAKIEITLVKSEKFDELAAA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2q3v-a2-m1-cA 89 89 1.0000 1.0000 1.0000 5.77e-59 2q3v-a2-m1-cA_2q3v-a2-m1-cB
2 2q3v-a1-m1-cA 89 89 1.0000 1.0000 1.0000 5.77e-59 2q3v-a1-m1-cA_2q3v-a1-m2-cB
3 2q3v-a2-m1-cB 99 94 0.9888 0.8889 0.9362 1.10e-55 2q3v-a2-m1-cA_2q3v-a2-m1-cB
4 2q3v-a1-m2-cB 99 94 0.9888 0.8889 0.9362 1.10e-55 2q3v-a1-m1-cA_2q3v-a1-m2-cB, 2q3v-a1-m1-cB_2q3v-a1-m2-cB
5 2q3v-a1-m1-cB 99 94 0.9888 0.8889 0.9362 1.10e-55 2q3v-a1-m1-cB_2q3v-a1-m2-cB
6 7dl8-a1-m1-cC 98 84 0.3596 0.3265 0.3810 1.57e-06 7dl8-a1-m1-cC_7dl8-a1-m1-cD
7 7dl8-a1-m1-cD 109 84 0.3596 0.2936 0.3810 2.05e-06 7dl8-a1-m1-cC_7dl8-a1-m1-cD, 7dl8-a1-m1-cD_7dl8-a1-m1-cA
8 7dl8-a1-m1-cA 114 85 0.3596 0.2807 0.3765 9.62e-05 7dl8-a1-m1-cD_7dl8-a1-m1-cA
9 5tf0-a1-m1-cB 706 53 0.2247 0.0283 0.3774 0.42 5tf0-a1-m1-cA_5tf0-a1-m1-cB
10 3j9o-a1-m9-cL 427 65 0.2135 0.0445 0.2923 0.77 3j9o-a1-m7-cB_3j9o-a1-m9-cL, 3j9o-a1-m7-cD_3j9o-a1-m9-cL, 3j9o-a1-m8-cB_3j9o-a1-m9-cL
11 3j9o-a1-m8-cB 427 65 0.2135 0.0445 0.2923 0.77 3j9o-a1-m8-cB_3j9o-a1-m9-cL
12 3j9o-a1-m7-cD 427 65 0.2135 0.0445 0.2923 0.77 3j9o-a1-m7-cD_3j9o-a1-m9-cL
13 3j9o-a1-m7-cB 427 65 0.2135 0.0445 0.2923 0.77 3j9o-a1-m7-cB_3j9o-a1-m9-cL
14 3trf-a2-m3-cB 168 61 0.2022 0.1071 0.2951 4.3 3trf-a2-m1-cB_3trf-a2-m3-cB
15 3trf-a2-m1-cB 168 61 0.2022 0.1071 0.2951 4.3 3trf-a2-m1-cB_3trf-a2-m3-cB
16 4e08-a1-m1-cB 186 35 0.1348 0.0645 0.3429 9.4 4e08-a1-m1-cA_4e08-a1-m1-cB
17 4e08-a1-m1-cA 186 35 0.1348 0.0645 0.3429 9.4 4e08-a1-m1-cA_4e08-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600