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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
KKRFEVKKWNAVALWAWDIVVDNCAICRNHICIECQANQASATSEECTVAWGVCNHAFHF
HCISRWLKTRQVCPLDNREWEFQK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3dqv-a3-m1-cY 84 84 1.0000 1.0000 1.0000 9.62e-58 3dqv-a3-m1-cY_3dqv-a3-m2-cR
2 1ldk-a2-m2-cC 88 87 1.0000 0.9545 0.9655 7.36e-56 1ldk-a2-m1-cC_1ldk-a2-m2-cC
3 1ldk-a2-m1-cC 88 87 1.0000 0.9545 0.9655 7.36e-56 1ldk-a2-m1-cC_1ldk-a2-m2-cC
4 3dqv-a3-m2-cR 85 85 0.9881 0.9765 0.9765 4.16e-55 3dqv-a3-m1-cY_3dqv-a3-m2-cR
5 4r2y-a6-m3-cC 65 69 0.3214 0.4154 0.3913 2.50e-11 4r2y-a6-m1-cC_4r2y-a6-m3-cC, 4r2y-a6-m3-cD_4r2y-a6-m3-cC
6 4r2y-a6-m1-cC 65 69 0.3214 0.4154 0.3913 2.50e-11 4r2y-a6-m1-cC_4r2y-a6-m3-cC, 4r2y-a6-m3-cD_4r2y-a6-m1-cC
7 4r2y-a6-m3-cD 62 69 0.3214 0.4355 0.3913 1.74e-10 4r2y-a6-m3-cD_4r2y-a6-m1-cC, 4r2y-a6-m3-cD_4r2y-a6-m3-cC
8 5din-a1-m1-cB 124 70 0.2024 0.1371 0.2429 0.031 5din-a1-m1-cA_5din-a1-m1-cB
9 5din-a1-m1-cA 120 70 0.2024 0.1417 0.2429 0.031 5din-a1-m1-cA_5din-a1-m1-cB
10 4whv-a2-m1-cJ 101 22 0.1071 0.0891 0.4091 2.4 4whv-a2-m1-cI_4whv-a2-m1-cJ
11 4whv-a2-m1-cI 101 22 0.1071 0.0891 0.4091 2.4 4whv-a2-m1-cI_4whv-a2-m1-cJ
12 5h7r-a1-m2-cD 124 70 0.1786 0.1210 0.2143 2.5 5h7r-a1-m1-cD_5h7r-a1-m2-cD
13 5h7r-a1-m1-cD 124 70 0.1786 0.1210 0.2143 2.5 5h7r-a1-m1-cD_5h7r-a1-m2-cD
14 4ayc-a1-m1-cA 136 22 0.1071 0.0662 0.4091 2.5 4ayc-a1-m2-cB_4ayc-a1-m1-cA
15 4ayc-a1-m2-cB 126 22 0.1071 0.0714 0.4091 2.7 4ayc-a1-m2-cB_4ayc-a1-m1-cA
16 2cdh-a1-m1-cJ 244 41 0.1548 0.0533 0.3171 4.2 2cdh-a1-m1-cI_2cdh-a1-m1-cJ
17 2cdh-a1-m1-cI 244 41 0.1548 0.0533 0.3171 4.2 2cdh-a1-m1-cI_2cdh-a1-m1-cJ
18 1edo-a1-m4-cA 244 41 0.1548 0.0533 0.3171 4.2 1edo-a1-m2-cA_1edo-a1-m4-cA
19 1edo-a1-m2-cA 244 41 0.1548 0.0533 0.3171 4.2 1edo-a1-m2-cA_1edo-a1-m4-cA
20 2pjq-a1-m1-cB 206 46 0.1429 0.0583 0.2609 4.8 2pjq-a1-m1-cB_2pjq-a1-m1-cC
21 4bm9-a1-m6-cA 301 44 0.1667 0.0465 0.3182 5.9 4bm9-a1-m2-cA_4bm9-a1-m6-cA, 4bm9-a1-m4-cA_4bm9-a1-m6-cA, 4bm9-a1-m5-cA_4bm9-a1-m6-cA
22 4bm9-a1-m5-cA 301 44 0.1667 0.0465 0.3182 5.9 4bm9-a1-m5-cA_4bm9-a1-m6-cA
23 4bm9-a1-m4-cA 301 44 0.1667 0.0465 0.3182 5.9 4bm9-a1-m4-cA_4bm9-a1-m6-cA
24 4bm9-a1-m2-cA 301 44 0.1667 0.0465 0.3182 5.9 4bm9-a1-m2-cA_4bm9-a1-m6-cA
25 3kic-a1-m3-cT 520 29 0.1429 0.0231 0.4138 6.1 3kic-a1-m2-cG_3kic-a1-m3-cT, 3kic-a1-m2-cP_3kic-a1-m3-cT, 3kic-a1-m3-cR_3kic-a1-m3-cT
26 3kic-a1-m3-cR 520 29 0.1429 0.0231 0.4138 6.1 3kic-a1-m3-cR_3kic-a1-m3-cT
27 3kic-a1-m2-cP 520 29 0.1429 0.0231 0.4138 6.1 3kic-a1-m2-cP_3kic-a1-m3-cT
28 3kic-a1-m2-cG 520 29 0.1429 0.0231 0.4138 6.1 3kic-a1-m2-cG_3kic-a1-m3-cT

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Reference:
Jacob Schwartz et al.

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