Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
KKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHA
FHFHCISRWLKTRQVCPLDNREWEFQKY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1ldk-a2-m2-cC 88 88 1.0000 1.0000 1.0000 9.83e-62 1ldk-a2-m1-cC_1ldk-a2-m2-cC
2 1ldk-a2-m1-cC 88 88 1.0000 1.0000 1.0000 9.83e-62 1ldk-a2-m1-cC_1ldk-a2-m2-cC
3 3dqv-a3-m2-cR 85 86 0.9659 1.0000 0.9884 4.43e-57 3dqv-a3-m1-cY_3dqv-a3-m2-cR
4 3dqv-a3-m1-cY 84 87 0.9545 1.0000 0.9655 7.71e-56 3dqv-a3-m1-cY_3dqv-a3-m2-cR
5 4r2y-a6-m3-cC 65 69 0.2955 0.4000 0.3768 6.39e-12 4r2y-a6-m1-cC_4r2y-a6-m3-cC, 4r2y-a6-m3-cD_4r2y-a6-m3-cC
6 4r2y-a6-m1-cC 65 69 0.2955 0.4000 0.3768 6.39e-12 4r2y-a6-m1-cC_4r2y-a6-m3-cC, 4r2y-a6-m3-cD_4r2y-a6-m1-cC
7 4r2y-a6-m3-cD 62 69 0.2955 0.4194 0.3768 4.10e-11 4r2y-a6-m3-cD_4r2y-a6-m1-cC, 4r2y-a6-m3-cD_4r2y-a6-m3-cC
8 5din-a1-m1-cA 120 30 0.1136 0.0833 0.3333 0.11 5din-a1-m1-cA_5din-a1-m1-cB
9 5din-a1-m1-cB 124 30 0.1136 0.0806 0.3333 0.12 5din-a1-m1-cA_5din-a1-m1-cB
10 4whv-a2-m1-cJ 101 32 0.1136 0.0990 0.3125 1.1 4whv-a2-m1-cI_4whv-a2-m1-cJ
11 4whv-a2-m1-cI 101 32 0.1136 0.0990 0.3125 1.1 4whv-a2-m1-cI_4whv-a2-m1-cJ
12 3kic-a1-m3-cT 520 34 0.1477 0.0250 0.3824 1.6 3kic-a1-m2-cG_3kic-a1-m3-cT, 3kic-a1-m2-cP_3kic-a1-m3-cT, 3kic-a1-m3-cR_3kic-a1-m3-cT
13 3kic-a1-m3-cR 520 34 0.1477 0.0250 0.3824 1.6 3kic-a1-m3-cR_3kic-a1-m3-cT
14 3kic-a1-m2-cP 520 34 0.1477 0.0250 0.3824 1.6 3kic-a1-m2-cP_3kic-a1-m3-cT
15 3kic-a1-m2-cG 520 34 0.1477 0.0250 0.3824 1.6 3kic-a1-m2-cG_3kic-a1-m3-cT
16 4ayc-a1-m1-cA 136 32 0.1136 0.0735 0.3125 2.1 4ayc-a1-m2-cB_4ayc-a1-m1-cA
17 4ayc-a1-m2-cB 126 32 0.1136 0.0794 0.3125 2.6 4ayc-a1-m2-cB_4ayc-a1-m1-cA
18 7kfr-a1-m9-cA 521 34 0.1364 0.0230 0.3529 6.4 7kfr-a1-m54-cA_7kfr-a1-m9-cA, 7kfr-a1-m55-cA_7kfr-a1-m9-cA, 7kfr-a1-m8-cA_7kfr-a1-m9-cA
19 7kfr-a1-m8-cA 521 34 0.1364 0.0230 0.3529 6.4 7kfr-a1-m8-cA_7kfr-a1-m9-cA
20 7kfr-a1-m55-cA 521 34 0.1364 0.0230 0.3529 6.4 7kfr-a1-m55-cA_7kfr-a1-m9-cA
21 7kfr-a1-m54-cA 521 34 0.1364 0.0230 0.3529 6.4 7kfr-a1-m54-cA_7kfr-a1-m9-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600