Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
KKRIINAPTLETLAMLKRRMPSESRNRLEMVRIDAIGLIMLPVPDLYFYADQASKSAHVA
VSEIFITTLAIFGEVAAVNEAMRIIED

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4olp-a2-m3-cC 87 87 1.0000 1.0000 1.0000 3.12e-59 4olp-a2-m3-cD_4olp-a2-m3-cC
2 4olp-a2-m3-cD 80 87 0.9195 1.0000 0.9195 8.82e-50 4olp-a2-m3-cD_4olp-a2-m3-cC
3 3i96-a1-m1-cB 111 88 0.3333 0.2613 0.3295 0.25 3i96-a1-m2-cC_3i96-a1-m1-cB
4 3i96-a1-m2-cC 109 74 0.2759 0.2202 0.3243 0.37 3i96-a1-m2-cC_3i96-a1-m1-cB
5 3ia0-a8-m1-cv 111 88 0.3333 0.2613 0.3295 0.87 3ia0-a8-m1-cu_3ia0-a8-m1-cv
6 3ia0-a8-m1-cu 111 88 0.3333 0.2613 0.3295 0.87 3ia0-a8-m1-cu_3ia0-a8-m1-cv
7 1spx-a1-m4-cA 237 38 0.1264 0.0464 0.2895 2.1 1spx-a1-m1-cA_1spx-a1-m4-cA, 1spx-a1-m2-cA_1spx-a1-m4-cA, 1spx-a1-m3-cA_1spx-a1-m4-cA
8 1spx-a1-m3-cA 237 38 0.1264 0.0464 0.2895 2.1 1spx-a1-m3-cA_1spx-a1-m4-cA
9 1spx-a1-m2-cA 237 38 0.1264 0.0464 0.2895 2.1 1spx-a1-m2-cA_1spx-a1-m4-cA
10 1spx-a1-m1-cA 237 38 0.1264 0.0464 0.2895 2.1 1spx-a1-m1-cA_1spx-a1-m4-cA
11 5w25-a3-m1-cA 583 39 0.1609 0.0240 0.3590 3.8 5w25-a3-m1-cB_5w25-a3-m1-cA
12 5w25-a3-m1-cB 566 39 0.1609 0.0247 0.3590 4.3 5w25-a3-m1-cB_5w25-a3-m1-cA
13 3bw1-a1-m4-cB 86 41 0.1839 0.1860 0.3902 8.5 3bw1-a1-m4-cA_3bw1-a1-m4-cB
14 3bw1-a1-m4-cA 86 41 0.1839 0.1860 0.3902 8.5 3bw1-a1-m4-cA_3bw1-a1-m4-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600