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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
KKRLTESQFQEAIQGLEVGQQTIEIARGVLVDGKPQATFATSLGLTRGAVSQAVHRVWAA
FEDKNLPEGYARVTAVLPEHQAYIVRKWEADAKK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5ckt-a2-m1-cC 99 94 1.0000 0.9495 1.0000 1.93e-65 5ckt-a2-m1-cB_5ckt-a2-m1-cC
2 5ckt-a2-m1-cB 99 94 1.0000 0.9495 1.0000 1.93e-65 5ckt-a2-m1-cB_5ckt-a2-m1-cC
3 2n5g-a1-m1-cB 101 94 1.0000 0.9307 1.0000 2.13e-65 2n5g-a1-m1-cA_2n5g-a1-m1-cB
4 2n5g-a1-m1-cA 101 94 1.0000 0.9307 1.0000 2.13e-65 2n5g-a1-m1-cA_2n5g-a1-m1-cB
5 2w7n-a1-m1-cA 94 94 1.0000 1.0000 1.0000 3.45e-65 2w7n-a1-m1-cA_2w7n-a1-m1-cB
6 2w7n-a1-m1-cB 95 93 0.9894 0.9789 1.0000 1.50e-64 2w7n-a1-m1-cA_2w7n-a1-m1-cB
7 7bbq-a1-m2-cA 92 76 0.3617 0.3696 0.4474 1.30e-06 7bbq-a1-m1-cA_7bbq-a1-m2-cA
8 7bbq-a1-m1-cA 92 76 0.3617 0.3696 0.4474 1.30e-06 7bbq-a1-m1-cA_7bbq-a1-m2-cA
9 2do6-a1-m1-cB 53 22 0.0957 0.1698 0.4091 2.9 2do6-a1-m1-cA_2do6-a1-m1-cB
10 2do6-a1-m1-cA 53 22 0.0957 0.1698 0.4091 2.9 2do6-a1-m1-cA_2do6-a1-m1-cB
11 5i10-a2-m2-cA 192 63 0.2234 0.1094 0.3333 3.5 5i10-a2-m1-cA_5i10-a2-m2-cA
12 5i10-a2-m1-cA 192 63 0.2234 0.1094 0.3333 3.5 5i10-a2-m1-cA_5i10-a2-m2-cA
13 8df2-a1-m1-cD 374 43 0.1489 0.0374 0.3256 5.8 8df2-a1-m1-cA_8df2-a1-m1-cD, 8df2-a1-m1-cB_8df2-a1-m1-cD, 8df2-a1-m1-cC_8df2-a1-m1-cD
14 8df2-a1-m1-cA 374 43 0.1489 0.0374 0.3256 5.8 8df2-a1-m1-cA_8df2-a1-m1-cD
15 8df2-a1-m1-cB 374 43 0.1489 0.0374 0.3256 5.9 8df2-a1-m1-cB_8df2-a1-m1-cD
16 8df2-a1-m1-cC 374 43 0.1489 0.0374 0.3256 6.0 8df2-a1-m1-cC_8df2-a1-m1-cD
17 6iud-a1-m1-cD 264 30 0.1064 0.0379 0.3333 6.6 6iud-a1-m1-cC_6iud-a1-m1-cD
18 6iud-a1-m1-cC 264 30 0.1064 0.0379 0.3333 6.6 6iud-a1-m1-cC_6iud-a1-m1-cD
19 4fn0-a1-m2-cA 220 33 0.1383 0.0591 0.3939 8.2 4fn0-a1-m1-cA_4fn0-a1-m2-cA
20 4fn0-a1-m1-cA 220 33 0.1383 0.0591 0.3939 8.2 4fn0-a1-m1-cA_4fn0-a1-m2-cA
21 7qd2-a1-m1-cA 308 22 0.1383 0.0422 0.5909 9.3 7qd2-a1-m1-cC_7qd2-a1-m1-cA
22 7qd0-a1-m2-cA 307 22 0.1383 0.0423 0.5909 9.4 7qd0-a1-m1-cA_7qd0-a1-m2-cA
23 7qd0-a1-m1-cA 307 22 0.1383 0.0423 0.5909 9.4 7qd0-a1-m1-cA_7qd0-a1-m2-cA
24 7qd2-a1-m1-cC 306 22 0.1383 0.0425 0.5909 9.6 7qd2-a1-m1-cC_7qd2-a1-m1-cA
25 8dek-a1-m1-cA 440 43 0.1489 0.0318 0.3256 10.0 8dek-a1-m1-cA_8dek-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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