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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
KKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKR
STITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1zbb-a1-m2-ch 99 99 1.0000 1.0000 1.0000 5.30e-69 1zbb-a1-m1-cH_1zbb-a1-m2-ch
2 1zbb-a1-m1-cH 99 99 1.0000 1.0000 1.0000 5.30e-69 1zbb-a1-m1-cH_1zbb-a1-m2-ch
3 3c9k-a1-m9-cF 90 90 0.8788 0.9667 0.9667 2.96e-61 3c9k-a1-m8-cB_3c9k-a1-m9-cF
4 3c9k-a1-m8-cB 90 90 0.8788 0.9667 0.9667 2.96e-61 3c9k-a1-m8-cB_3c9k-a1-m9-cF
5 6m2m-a1-m1-cL 89 89 0.7071 0.7865 0.7865 1.02e-50 6m2m-a1-m1-cB_6m2m-a1-m1-cL
6 6m2m-a1-m1-cB 86 86 0.6970 0.8023 0.8023 1.74e-49 6m2m-a1-m1-cB_6m2m-a1-m1-cL
7 3ibx-a1-m2-cA 221 65 0.1818 0.0814 0.2769 0.34 3ibx-a1-m2-cD_3ibx-a1-m2-cA
8 3ibx-a1-m1-cA 221 65 0.1818 0.0814 0.2769 0.34 3ibx-a1-m2-cD_3ibx-a1-m1-cA
9 2rd3-a3-m2-cD 218 65 0.1818 0.0826 0.2769 0.37 2rd3-a3-m1-cD_2rd3-a3-m2-cD
10 2rd3-a3-m1-cD 218 65 0.1818 0.0826 0.2769 0.37 2rd3-a3-m1-cD_2rd3-a3-m2-cD
11 7lv9-a1-m1-cE 102 67 0.1717 0.1667 0.2537 0.44 7lv9-a1-m1-cA_7lv9-a1-m1-cE
12 7lv9-a1-m1-cA 102 67 0.1717 0.1667 0.2537 0.44 7lv9-a1-m1-cA_7lv9-a1-m1-cE
13 2rp5-a1-m1-cB 117 34 0.1313 0.1111 0.3824 1.3 2rp5-a1-m1-cA_2rp5-a1-m1-cB
14 2rp5-a1-m1-cA 117 34 0.1313 0.1111 0.3824 1.3 2rp5-a1-m1-cA_2rp5-a1-m1-cB
15 6m2m-a1-m1-cK 81 40 0.1515 0.1852 0.3750 6.2 6m2m-a1-m1-cK_6m2m-a1-m1-cA
16 6m2m-a1-m1-cA 88 40 0.1515 0.1705 0.3750 7.6 6m2m-a1-m1-cK_6m2m-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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