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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=10)
KKVLGDVIEV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3sgm-a2-m3-cD 10 10 1.0000 1.0000 1.0000 4.8 3sgm-a2-m1-cC_3sgm-a2-m3-cD, 3sgm-a2-m3-cC_3sgm-a2-m3-cD
2 3sgm-a2-m3-cC 10 10 1.0000 1.0000 1.0000 4.8 3sgm-a2-m3-cC_3sgm-a2-m3-cD
3 3sgm-a2-m1-cC 10 10 1.0000 1.0000 1.0000 4.8 3sgm-a2-m1-cC_3sgm-a2-m3-cD
4 3j07-a1-m1-cX 175 9 0.9000 0.0514 1.0000 6.4 3j07-a1-m1-cG_3j07-a1-m1-cX, 3j07-a1-m1-cS_3j07-a1-m1-cX, 3j07-a1-m1-cW_3j07-a1-m1-cX
5 3j07-a1-m1-cW 175 9 0.9000 0.0514 1.0000 6.4 3j07-a1-m1-cI_3j07-a1-m1-cW, 3j07-a1-m1-cW_3j07-a1-m1-cX
6 3j07-a1-m1-cS 175 9 0.9000 0.0514 1.0000 6.4 3j07-a1-m1-cS_3j07-a1-m1-cX
7 3j07-a1-m1-cI 175 9 0.9000 0.0514 1.0000 6.4 3j07-a1-m1-cI_3j07-a1-m1-cW
8 3j07-a1-m1-cG 175 9 0.9000 0.0514 1.0000 6.4 3j07-a1-m1-cG_3j07-a1-m1-cX
9 2ygd-a1-m1-cX 175 9 0.9000 0.0514 1.0000 6.4 2ygd-a1-m1-cU_2ygd-a1-m1-cX, 2ygd-a1-m1-cW_2ygd-a1-m1-cX
10 2ygd-a1-m1-cW 175 9 0.9000 0.0514 1.0000 6.4 2ygd-a1-m1-cC_2ygd-a1-m1-cW, 2ygd-a1-m1-cW_2ygd-a1-m1-cX
11 2ygd-a1-m1-cV 175 9 0.9000 0.0514 1.0000 6.4 2ygd-a1-m1-cF_2ygd-a1-m1-cV
12 2ygd-a1-m1-cU 175 9 0.9000 0.0514 1.0000 6.4 2ygd-a1-m1-cF_2ygd-a1-m1-cU, 2ygd-a1-m1-cU_2ygd-a1-m1-cX
13 2ygd-a1-m1-cF 175 9 0.9000 0.0514 1.0000 6.4 2ygd-a1-m1-cF_2ygd-a1-m1-cU, 2ygd-a1-m1-cF_2ygd-a1-m1-cV
14 2ygd-a1-m1-cC 175 9 0.9000 0.0514 1.0000 6.4 2ygd-a1-m1-cC_2ygd-a1-m1-cW

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Reference:
Jacob Schwartz et al.

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