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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
KKVLTRVRRIRGQIDALERSLEGDAECRAILQQIAAVRGAANGLAEVLESHIRETFDRND
CYSREVSQSVDDTIELVRAYLK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5lbm-a1-m1-cD 89 82 1.0000 0.9213 1.0000 1.43e-54 5lbm-a1-m1-cA_5lbm-a1-m1-cD, 5lbm-a1-m1-cB_5lbm-a1-m1-cD, 5lbm-a1-m1-cC_5lbm-a1-m1-cD
2 5lbm-a1-m1-cC 89 82 1.0000 0.9213 1.0000 1.43e-54 5lbm-a1-m1-cC_5lbm-a1-m1-cD
3 5lbm-a1-m1-cB 82 82 1.0000 1.0000 1.0000 2.58e-54 5lbm-a1-m1-cA_5lbm-a1-m1-cB, 5lbm-a1-m1-cB_5lbm-a1-m1-cD
4 5lbm-a1-m1-cA 82 82 1.0000 1.0000 1.0000 2.58e-54 5lbm-a1-m1-cA_5lbm-a1-m1-cB, 5lbm-a1-m1-cA_5lbm-a1-m1-cD
5 5lcy-a1-m1-cD 88 81 0.4878 0.4545 0.4938 4.76e-20 5lcy-a1-m1-cA_5lcy-a1-m1-cD, 5lcy-a1-m1-cC_5lcy-a1-m1-cD
6 5lcy-a1-m1-cC 88 81 0.4878 0.4545 0.4938 4.76e-20 5lcy-a1-m1-cC_5lcy-a1-m1-cD
7 5lcy-a1-m1-cA 88 81 0.4878 0.4545 0.4938 4.76e-20 5lcy-a1-m1-cA_5lcy-a1-m1-cD
8 4adz-a1-m2-cB 90 52 0.2683 0.2444 0.4231 3.35e-05 4adz-a1-m2-cA_4adz-a1-m2-cB
9 4adz-a1-m2-cA 90 52 0.2683 0.2444 0.4231 3.35e-05 4adz-a1-m2-cA_4adz-a1-m2-cB
10 2hh7-a2-m4-cA 85 56 0.2439 0.2353 0.3571 4.12e-05 2hh7-a2-m1-cA_2hh7-a2-m4-cA, 2hh7-a2-m3-cA_2hh7-a2-m4-cA
11 2hh7-a2-m3-cA 85 56 0.2439 0.2353 0.3571 4.12e-05 2hh7-a2-m3-cA_2hh7-a2-m4-cA
12 2hh7-a2-m1-cA 85 56 0.2439 0.2353 0.3571 4.12e-05 2hh7-a2-m1-cA_2hh7-a2-m4-cA
13 4uig-a1-m4-cA 91 52 0.2683 0.2418 0.4231 4.46e-05 4uig-a1-m3-cA_4uig-a1-m4-cA
14 4uig-a1-m3-cA 91 52 0.2683 0.2418 0.4231 4.46e-05 4uig-a1-m3-cA_4uig-a1-m4-cA
15 5fmn-a1-m2-cB 89 59 0.2439 0.2247 0.3390 9.69e-05 5fmn-a1-m1-cA_5fmn-a1-m2-cB, 5fmn-a1-m2-cA_5fmn-a1-m2-cB
16 5fmn-a1-m2-cA 86 59 0.2439 0.2326 0.3390 1.01e-04 5fmn-a1-m2-cA_5fmn-a1-m2-cB
17 5fmn-a1-m1-cA 86 59 0.2439 0.2326 0.3390 1.01e-04 5fmn-a1-m1-cA_5fmn-a1-m2-cB
18 6ahx-a1-m2-cA 60 48 0.2317 0.3167 0.3958 0.002 6ahx-a1-m1-cA_6ahx-a1-m2-cA
19 6ahx-a1-m1-cA 60 48 0.2317 0.3167 0.3958 0.002 6ahx-a1-m1-cA_6ahx-a1-m2-cA
20 4m1p-a2-m9-cA 96 86 0.2561 0.2188 0.2442 0.002 4m1p-a2-m12-cA_4m1p-a2-m9-cA
21 4m1p-a2-m12-cA 96 86 0.2561 0.2188 0.2442 0.002 4m1p-a2-m12-cA_4m1p-a2-m9-cA
22 4m1p-a1-m4-cA 96 86 0.2561 0.2188 0.2442 0.002 4m1p-a1-m3-cA_4m1p-a1-m4-cA
23 4m1p-a1-m3-cA 96 86 0.2561 0.2188 0.2442 0.002 4m1p-a1-m3-cA_4m1p-a1-m4-cA
24 5tpm-a2-m1-cD 136 66 0.2561 0.1544 0.3182 1.5 5tpm-a2-m1-cD_5tpm-a2-m1-cC
25 5tpm-a2-m1-cC 148 66 0.2561 0.1419 0.3182 1.6 5tpm-a2-m1-cD_5tpm-a2-m1-cC
26 2p9x-a2-m2-cB 95 24 0.1463 0.1263 0.5000 1.7 2p9x-a2-m2-cB_2p9x-a2-m2-cC
27 2p9x-a1-m1-cB 95 24 0.1463 0.1263 0.5000 1.7 2p9x-a1-m1-cB_2p9x-a1-m1-cD
28 2p9x-a2-m2-cC 98 24 0.1463 0.1224 0.5000 1.8 2p9x-a2-m1-cA_2p9x-a2-m2-cC, 2p9x-a2-m2-cB_2p9x-a2-m2-cC
29 2p9x-a2-m1-cA 98 24 0.1463 0.1224 0.5000 1.8 2p9x-a2-m1-cA_2p9x-a2-m2-cC
30 2p9x-a1-m1-cD 98 24 0.1463 0.1224 0.5000 1.8 2p9x-a1-m1-cB_2p9x-a1-m1-cD, 2p9x-a1-m1-cC_2p9x-a1-m1-cD
31 2p9x-a1-m1-cC 98 24 0.1463 0.1224 0.5000 1.8 2p9x-a1-m1-cC_2p9x-a1-m1-cD
32 2r79-a1-m6-cA 279 35 0.1951 0.0573 0.4571 2.4 2r79-a1-m2-cA_2r79-a1-m6-cA, 2r79-a1-m3-cA_2r79-a1-m6-cA, 2r79-a1-m5-cA_2r79-a1-m6-cA
33 2r79-a1-m5-cA 279 35 0.1951 0.0573 0.4571 2.4 2r79-a1-m5-cA_2r79-a1-m6-cA
34 2r79-a1-m3-cA 279 35 0.1951 0.0573 0.4571 2.4 2r79-a1-m3-cA_2r79-a1-m6-cA
35 2r79-a1-m2-cA 279 35 0.1951 0.0573 0.4571 2.4 2r79-a1-m2-cA_2r79-a1-m6-cA
36 4l6y-a1-m1-cA 445 44 0.1829 0.0337 0.3409 3.0 4l6y-a1-m1-cB_4l6y-a1-m1-cA
37 4l6y-a1-m1-cB 432 44 0.1829 0.0347 0.3409 3.0 4l6y-a1-m1-cB_4l6y-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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