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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=59)
KKYAKSKYDFVARNSSELSVMKDDVLEILDDRRQWWKVRNASGDSGFVPNNILDIMRTP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1i07-a1-m1-cB 59 59 1.0000 1.0000 1.0000 1.08e-38 1i07-a1-m1-cA_1i07-a1-m1-cB
2 1i07-a1-m1-cA 59 59 1.0000 1.0000 1.0000 1.08e-38 1i07-a1-m1-cA_1i07-a1-m1-cB
3 1jqq-a1-m1-cD 73 63 0.3559 0.2877 0.3333 4.00e-08 1jqq-a1-m1-cC_1jqq-a1-m1-cD, 1jqq-a1-m1-cD_1jqq-a1-m1-cA
4 1jqq-a1-m1-cA 79 63 0.3559 0.2658 0.3333 4.56e-08 1jqq-a1-m1-cA_1jqq-a1-m1-cB, 1jqq-a1-m1-cD_1jqq-a1-m1-cA
5 1jqq-a1-m1-cB 82 63 0.3559 0.2561 0.3333 4.92e-08 1jqq-a1-m1-cA_1jqq-a1-m1-cB
6 1jqq-a1-m1-cC 70 62 0.3390 0.2857 0.3226 3.92e-07 1jqq-a1-m1-cC_1jqq-a1-m1-cD
7 6a9c-a1-m1-cA 59 48 0.3051 0.3051 0.3750 7.85e-06 6a9c-a1-m1-cA_6a9c-a1-m1-cB
8 6a9c-a1-m1-cB 66 48 0.3051 0.2727 0.3750 9.49e-06 6a9c-a1-m1-cA_6a9c-a1-m1-cB
9 1bu1-a1-m1-cC 56 45 0.2712 0.2857 0.3556 1.27e-05 1bu1-a1-m1-cC_1bu1-a1-m1-cE
10 1z9z-a5-m5-cB 60 51 0.3220 0.3167 0.3725 1.40e-05 1z9z-a5-m1-cB_1z9z-a5-m5-cB
11 1z9z-a5-m1-cB 60 51 0.3220 0.3167 0.3725 1.40e-05 1z9z-a5-m1-cB_1z9z-a5-m5-cB
12 1z9z-a4-m4-cB 60 51 0.3220 0.3167 0.3725 1.40e-05 1z9z-a4-m1-cA_1z9z-a4-m4-cB
13 1z9z-a4-m1-cA 60 51 0.3220 0.3167 0.3725 1.40e-05 1z9z-a4-m1-cA_1z9z-a4-m4-cB
14 1bu1-a1-m1-cE 57 45 0.2712 0.2807 0.3556 1.50e-05 1bu1-a1-m1-cC_1bu1-a1-m1-cE
15 1wyx-a1-m1-cB 69 57 0.3729 0.3188 0.3860 3.57e-05 1wyx-a1-m1-cA_1wyx-a1-m1-cB
16 1wyx-a1-m1-cA 68 57 0.3729 0.3235 0.3860 3.90e-05 1wyx-a1-m1-cA_1wyx-a1-m1-cB
17 4u5w-a1-m1-cB 163 47 0.2712 0.0982 0.3404 6.25e-05 4u5w-a1-m1-cD_4u5w-a1-m1-cB
18 2hck-a1-m1-cB 437 45 0.2712 0.0366 0.3556 6.59e-05 2hck-a1-m1-cA_2hck-a1-m1-cB
19 2hck-a1-m1-cA 437 45 0.2712 0.0366 0.3556 6.59e-05 2hck-a1-m1-cA_2hck-a1-m1-cB
20 4u5w-a1-m1-cD 160 47 0.2712 0.1000 0.3404 6.99e-05 4u5w-a1-m1-cD_4u5w-a1-m1-cB
21 4xi2-a1-m2-cA 421 47 0.2373 0.0333 0.2979 2.04e-04 4xi2-a1-m1-cA_4xi2-a1-m2-cA
22 4xi2-a1-m1-cA 421 47 0.2373 0.0333 0.2979 2.04e-04 4xi2-a1-m1-cA_4xi2-a1-m2-cA
23 7pvz-a1-m1-cB 60 48 0.2542 0.2500 0.3125 2.57e-04 7pvz-a1-m1-cA_7pvz-a1-m1-cB
24 7pvz-a1-m1-cA 60 48 0.2542 0.2500 0.3125 2.57e-04 7pvz-a1-m1-cA_7pvz-a1-m1-cB
25 4le9-a1-m2-cA 59 48 0.2542 0.2542 0.3125 0.001 4le9-a1-m1-cA_4le9-a1-m2-cA
26 4le9-a1-m1-cA 59 48 0.2542 0.2542 0.3125 0.001 4le9-a1-m1-cA_4le9-a1-m2-cA
27 2iim-a1-m2-cA 62 47 0.2203 0.2097 0.2766 0.002 2iim-a1-m1-cA_2iim-a1-m2-cA
28 2iim-a1-m1-cA 62 47 0.2203 0.2097 0.2766 0.002 2iim-a1-m1-cA_2iim-a1-m2-cA
29 3nmz-a1-m1-cD 84 45 0.2712 0.1905 0.3556 0.005 3nmz-a1-m1-cD_3nmz-a1-m1-cC
30 2d0n-a1-m1-cA 59 56 0.3051 0.3051 0.3214 0.005 2d0n-a1-m1-cC_2d0n-a1-m1-cA
31 3nmz-a1-m1-cC 85 45 0.2712 0.1882 0.3556 0.005 3nmz-a1-m1-cD_3nmz-a1-m1-cC
32 1x27-a1-m1-cF 163 47 0.2203 0.0798 0.2766 0.007 1x27-a1-m1-cA_1x27-a1-m1-cF, 1x27-a1-m1-cD_1x27-a1-m1-cF
33 1x27-a1-m1-cD 163 47 0.2203 0.0798 0.2766 0.007 1x27-a1-m1-cD_1x27-a1-m1-cF
34 1x27-a1-m1-cA 163 47 0.2203 0.0798 0.2766 0.007 1x27-a1-m1-cA_1x27-a1-m1-cF
35 1k9a-a7-m2-cD 433 48 0.2712 0.0370 0.3333 0.015 1k9a-a7-m2-cD_1k9a-a7-m1-cC
36 2d0n-a1-m1-cC 56 54 0.2712 0.2857 0.2963 0.015 2d0n-a1-m1-cC_2d0n-a1-m1-cA
37 1k9a-a7-m1-cC 438 48 0.2712 0.0365 0.3333 0.015 1k9a-a7-m2-cD_1k9a-a7-m1-cC
38 4iim-a1-m1-cB 55 53 0.2203 0.2364 0.2453 0.015 4iim-a1-m1-cB_4iim-a1-m1-cA
39 1abq-a1-m2-cA 56 48 0.2712 0.2857 0.3333 0.016 1abq-a1-m1-cA_1abq-a1-m2-cA
40 1abq-a1-m1-cA 56 48 0.2712 0.2857 0.3333 0.016 1abq-a1-m1-cA_1abq-a1-m2-cA
41 4iim-a1-m1-cA 57 53 0.2203 0.2281 0.2453 0.018 4iim-a1-m1-cB_4iim-a1-m1-cA
42 2p4r-a2-m2-cA 55 50 0.2373 0.2545 0.2800 0.018 2p4r-a2-m1-cA_2p4r-a2-m2-cA
43 2p4r-a2-m1-cA 55 50 0.2373 0.2545 0.2800 0.018 2p4r-a2-m1-cA_2p4r-a2-m2-cA
44 2esw-a3-m1-cA 60 50 0.2373 0.2333 0.2800 0.018 2esw-a3-m1-cB_2esw-a3-m1-cA
45 2ak5-a1-m2-cA 60 50 0.2373 0.2333 0.2800 0.019 2ak5-a1-m2-cA_2ak5-a1-m2-cB
46 2esw-a3-m1-cB 57 50 0.2373 0.2456 0.2800 0.019 2esw-a3-m1-cB_2esw-a3-m1-cA
47 2ak5-a1-m2-cB 64 49 0.2373 0.2188 0.2857 0.022 2ak5-a1-m2-cA_2ak5-a1-m2-cB
48 4iio-a1-m1-cB 57 53 0.2034 0.2105 0.2264 0.024 4iio-a1-m1-cB_4iio-a1-m1-cA
49 4iio-a1-m1-cA 63 53 0.2034 0.1905 0.2264 0.028 4iio-a1-m1-cB_4iio-a1-m1-cA
50 5sxp-a2-m1-cD 60 49 0.2373 0.2333 0.2857 0.031 5sxp-a2-m1-cD_5sxp-a2-m1-cB
51 5sxp-a2-m1-cB 61 49 0.2373 0.2295 0.2857 0.033 5sxp-a2-m1-cD_5sxp-a2-m1-cB
52 2oaw-a5-m4-cD 65 50 0.2712 0.2462 0.3200 0.064 2oaw-a5-m1-cB_2oaw-a5-m4-cD, 2oaw-a5-m3-cC_2oaw-a5-m4-cD
53 2oaw-a5-m3-cC 65 50 0.2712 0.2462 0.3200 0.064 2oaw-a5-m3-cC_2oaw-a5-m4-cD
54 2oaw-a5-m1-cB 65 50 0.2712 0.2462 0.3200 0.064 2oaw-a5-m1-cB_2oaw-a5-m4-cD
55 1opl-a3-m2-cA 451 48 0.2712 0.0355 0.3333 0.086 1opl-a3-m1-cA_1opl-a3-m2-cA
56 1opl-a3-m1-cA 451 48 0.2712 0.0355 0.3333 0.086 1opl-a3-m1-cA_1opl-a3-m2-cA
57 3eg1-a1-m1-cB 56 48 0.2542 0.2679 0.3125 0.10 3eg1-a1-m1-cB_3eg1-a1-m1-cA
58 3eg1-a1-m1-cA 58 48 0.2542 0.2586 0.3125 0.11 3eg1-a1-m1-cB_3eg1-a1-m1-cA
59 2sem-a1-m1-cB 59 37 0.1864 0.1864 0.2973 0.13 2sem-a1-m1-cA_2sem-a1-m1-cB
60 2sem-a1-m1-cA 58 53 0.2373 0.2414 0.2642 0.13 2sem-a1-m1-cA_2sem-a1-m1-cB
61 1ov3-a2-m2-cB 127 51 0.1864 0.0866 0.2157 0.14 1ov3-a2-m2-cB_1ov3-a2-m2-cA
62 1ov3-a2-m2-cA 134 51 0.1864 0.0821 0.2157 0.16 1ov3-a2-m1-cA_1ov3-a2-m2-cA, 1ov3-a2-m2-cB_1ov3-a2-m2-cA
63 1ov3-a2-m1-cA 134 51 0.1864 0.0821 0.2157 0.16 1ov3-a2-m1-cA_1ov3-a2-m2-cA
64 2d1x-a2-m1-cD 59 55 0.2881 0.2881 0.3091 0.51 2d1x-a2-m1-cD_2d1x-a2-m1-cC
65 2d1x-a2-m1-cC 66 55 0.2881 0.2576 0.3091 0.60 2d1x-a2-m1-cD_2d1x-a2-m1-cC
66 1y1u-a2-m2-cC 544 52 0.2034 0.0221 0.2308 2.7 1y1u-a2-m1-cC_1y1u-a2-m2-cC
67 1y1u-a2-m1-cC 544 52 0.2034 0.0221 0.2308 2.7 1y1u-a2-m1-cC_1y1u-a2-m2-cC
68 7dpa-a1-m1-cD 1642 37 0.1864 0.0067 0.2973 3.5 7dpa-a1-m1-cA_7dpa-a1-m1-cD
69 7dpa-a1-m1-cA 1642 37 0.1864 0.0067 0.2973 3.5 7dpa-a1-m1-cA_7dpa-a1-m1-cD
70 2acv-a1-m1-cB 456 56 0.2712 0.0351 0.2857 5.3 2acv-a1-m1-cB_2acv-a1-m1-cA
71 3uqh-a1-m1-cB 155 21 0.1695 0.0645 0.4762 5.8 3uqh-a1-m1-cB_3uqh-a1-m1-cA
72 3r6p-a2-m2-cA 154 21 0.1695 0.0649 0.4762 5.9 3r6p-a2-m1-cA_3r6p-a2-m2-cA
73 3r6p-a2-m1-cA 154 21 0.1695 0.0649 0.4762 5.9 3r6p-a2-m1-cA_3r6p-a2-m2-cA
74 3uqh-a1-m1-cA 159 21 0.1695 0.0629 0.4762 6.0 3uqh-a1-m1-cB_3uqh-a1-m1-cA
75 2acv-a1-m1-cA 461 56 0.2712 0.0347 0.2857 6.2 2acv-a1-m1-cB_2acv-a1-m1-cA
76 3p3a-a1-m1-cA 288 24 0.1864 0.0382 0.4583 6.4 3p3a-a1-m1-cB_3p3a-a1-m1-cA
77 3p3a-a1-m1-cB 286 24 0.1864 0.0385 0.4583 6.5 3p3a-a1-m1-cB_3p3a-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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