Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=88)
KLAVLPEQPGCYLMKDKHGTVIYVGKAKSLKERVRSYFTGTHDGKTQRLVEEIADFEYIV
TSSNAEALILEMNLIKKHDPKYNVMLKD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1yd6-a2-m2-cA 95 88 1.0000 0.9263 1.0000 2.86e-62 1yd6-a2-m2-cA_1yd6-a2-m2-cD
2 1yd6-a2-m1-cA 95 88 1.0000 0.9263 1.0000 2.86e-62 1yd6-a2-m2-cC_1yd6-a2-m1-cA
3 1yd6-a2-m2-cB 88 88 1.0000 1.0000 1.0000 3.14e-62 1yd6-a2-m1-cB_1yd6-a2-m2-cB
4 1yd6-a2-m1-cB 88 88 1.0000 1.0000 1.0000 3.14e-62 1yd6-a2-m1-cB_1yd6-a2-m2-cB
5 1yd6-a2-m2-cD 96 88 1.0000 0.9167 1.0000 3.29e-62 1yd6-a2-m1-cC_1yd6-a2-m2-cD, 1yd6-a2-m2-cA_1yd6-a2-m2-cD
6 1yd6-a2-m2-cC 94 87 0.9886 0.9255 1.0000 2.52e-61 1yd6-a2-m2-cC_1yd6-a2-m1-cA
7 1yd6-a2-m1-cC 94 87 0.9886 0.9255 1.0000 2.52e-61 1yd6-a2-m1-cC_1yd6-a2-m2-cD
8 2wsh-a1-m1-cC 126 27 0.1023 0.0714 0.3333 5.4 2wsh-a1-m1-cC_2wsh-a1-m1-cD
9 7epq-a1-m1-cB 292 69 0.1818 0.0548 0.2319 5.8 7epq-a1-m1-cB_7epq-a1-m1-cA
10 7epq-a1-m1-cA 296 69 0.1818 0.0541 0.2319 6.0 7epq-a1-m1-cB_7epq-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600