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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
KLAVVTGQIVCTVRHHGLAHDKLLVEIDPQGNPDGQCAVAIDNIGAGTGEWVLLVSGSSA
RQAHKSETSPVDLCVIGIVDEVVSGGQVIFHKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2hd3-a1-m1-cD 93 93 1.0000 1.0000 1.0000 4.70e-63 2hd3-a1-m1-cC_2hd3-a1-m1-cD
2 2z9h-a1-m1-cB 97 95 0.9785 0.9381 0.9579 6.12e-60 2z9h-a1-m1-cC_2z9h-a1-m1-cB
3 2hd3-a1-m1-cC 81 93 0.8710 1.0000 0.8710 1.26e-49 2hd3-a1-m1-cC_2hd3-a1-m1-cD
4 2z9h-a1-m1-cC 83 94 0.8387 0.9398 0.8298 2.68e-46 2z9h-a1-m1-cC_2z9h-a1-m1-cB
5 4jw0-a1-m1-cD 95 90 0.3978 0.3895 0.4111 8.36e-15 4jw0-a1-m1-cC_4jw0-a1-m1-cD
6 4jw0-a1-m1-cC 95 90 0.3978 0.3895 0.4111 8.36e-15 4jw0-a1-m1-cC_4jw0-a1-m1-cD
7 2qw7-a2-m1-cJ 96 94 0.3763 0.3646 0.3723 5.61e-13 2qw7-a2-m1-cI_2qw7-a2-m1-cJ
8 2qw7-a2-m1-cI 96 94 0.3763 0.3646 0.3723 5.61e-13 2qw7-a2-m1-cI_2qw7-a2-m1-cJ
9 4i7a-a1-m1-cE 87 83 0.3871 0.4138 0.4337 1.02e-12 4i7a-a1-m1-cD_4i7a-a1-m1-cE
10 4i7a-a1-m1-cD 87 83 0.3871 0.4138 0.4337 1.02e-12 4i7a-a1-m1-cD_4i7a-a1-m1-cE
11 2rcf-a1-m1-cE 80 81 0.3548 0.4125 0.4074 1.61e-11 2rcf-a1-m1-cD_2rcf-a1-m1-cE
12 2rcf-a1-m1-cD 80 81 0.3548 0.4125 0.4074 1.61e-11 2rcf-a1-m1-cD_2rcf-a1-m1-cE
13 5l37-a1-m1-cE 78 78 0.2903 0.3462 0.3462 8.34e-07 5l37-a1-m1-cD_5l37-a1-m1-cE
14 5l37-a1-m1-cD 77 75 0.2796 0.3377 0.3467 6.24e-06 5l37-a1-m1-cD_5l37-a1-m1-cE
15 6jy5-a1-m1-cD 82 76 0.2903 0.3293 0.3553 5.36e-04 6jy5-a1-m1-cB_6jy5-a1-m1-cD
16 6jy5-a1-m1-cB 82 76 0.2903 0.3293 0.3553 5.36e-04 6jy5-a1-m1-cB_6jy5-a1-m1-cD
17 4qdc-a1-m3-cA 369 47 0.1828 0.0461 0.3617 0.48 4qdc-a1-m2-cA_4qdc-a1-m3-cA
18 4qdc-a1-m2-cA 369 47 0.1828 0.0461 0.3617 0.48 4qdc-a1-m2-cA_4qdc-a1-m3-cA
19 6ymh-a1-m1-cAAA 153 72 0.2258 0.1373 0.2917 4.8 6ymh-a1-m1-cAAA_6ymh-a1-m1-cBBB
20 6ymh-a1-m1-cBBB 202 72 0.2258 0.1040 0.2917 5.4 6ymh-a1-m1-cAAA_6ymh-a1-m1-cBBB

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Reference:
Jacob Schwartz et al.

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