Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
KLLVVYDVSDDSKRNKLANNLKKLGLERIQRSAFEGDDRKDLVRVVKLIVDTNTDIVHII
PLGIRDWERRIVIGR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3exc-a1-m2-cX 75 75 1.0000 1.0000 1.0000 1.88e-47 3exc-a1-m1-cX_3exc-a1-m2-cX
2 3exc-a1-m1-cX 75 75 1.0000 1.0000 1.0000 1.88e-47 3exc-a1-m1-cX_3exc-a1-m2-cX
3 2ivy-a1-m2-cA 88 82 0.4133 0.3523 0.3780 4.03e-08 2ivy-a1-m1-cA_2ivy-a1-m2-cA
4 2ivy-a1-m1-cA 88 82 0.4133 0.3523 0.3780 4.03e-08 2ivy-a1-m1-cA_2ivy-a1-m2-cA
5 1zpw-a2-m2-cX 82 32 0.2533 0.2317 0.5938 4.24e-05 1zpw-a2-m1-cX_1zpw-a2-m2-cX
6 1zpw-a2-m1-cX 82 32 0.2533 0.2317 0.5938 4.24e-05 1zpw-a2-m1-cX_1zpw-a2-m2-cX
7 1x7i-a1-m1-cA 236 39 0.1600 0.0508 0.3077 1.4 1x7i-a1-m1-cA_1x7i-a1-m1-cB
8 1x7i-a1-m1-cB 238 39 0.1600 0.0504 0.3077 1.4 1x7i-a1-m1-cA_1x7i-a1-m1-cB
9 5j0k-a1-m1-cA 74 41 0.2000 0.2027 0.3659 2.0 5j0k-a1-m1-cB_5j0k-a1-m1-cA
10 5j0k-a1-m1-cB 73 41 0.2000 0.2055 0.3659 2.0 5j0k-a1-m1-cB_5j0k-a1-m1-cA
11 3f4b-a1-m1-cC 282 23 0.1333 0.0355 0.4348 2.0 3f4b-a1-m1-cC_3f4b-a1-m1-cD
12 3f4b-a1-m1-cA 284 23 0.1333 0.0352 0.4348 2.1 3f4b-a1-m1-cA_3f4b-a1-m1-cD
13 3f4b-a1-m1-cD 289 23 0.1333 0.0346 0.4348 2.2 3f4b-a1-m1-cA_3f4b-a1-m1-cD, 3f4b-a1-m1-cB_3f4b-a1-m1-cD, 3f4b-a1-m1-cC_3f4b-a1-m1-cD
14 3f4b-a1-m1-cB 289 23 0.1333 0.0346 0.4348 2.2 3f4b-a1-m1-cB_3f4b-a1-m1-cD
15 3k53-a2-m1-cD 270 50 0.2133 0.0593 0.3200 5.3 3k53-a2-m1-cC_3k53-a2-m1-cD
16 3k53-a2-m1-cC 267 50 0.2133 0.0599 0.3200 5.7 3k53-a2-m1-cC_3k53-a2-m1-cD
17 3tnj-a1-m2-cA 130 42 0.1467 0.0846 0.2619 7.2 3tnj-a1-m1-cA_3tnj-a1-m2-cA
18 3tnj-a1-m1-cA 130 42 0.1467 0.0846 0.2619 7.2 3tnj-a1-m1-cA_3tnj-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600