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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
KLNKLVEHIKELLQQLNKNWHRLQSNLHDMLQQMEQLFQEFQHFMQGNQDDGKLQNMIHE
MQQFMNQLDNHLQSLSDTVHHFHNKLQELMNNFHHLV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6kos-a1-m1-cB 97 97 1.0000 1.0000 1.0000 3.76e-62 6kos-a1-m1-cB_6kos-a1-m1-cA
2 6kos-a1-m1-cA 101 97 1.0000 0.9604 1.0000 3.94e-62 6kos-a1-m1-cB_6kos-a1-m1-cA
3 3vjf-a1-m1-cA 92 97 0.8454 0.8913 0.8454 1.41e-33 3vjf-a1-m1-cB_3vjf-a1-m1-cA
4 3vjf-a1-m1-cB 83 96 0.7629 0.8916 0.7708 1.00e-25 3vjf-a1-m1-cB_3vjf-a1-m1-cA
5 7lht-a1-m1-cB 1795 68 0.1959 0.0106 0.2794 0.89 7lht-a1-m1-cA_7lht-a1-m1-cB
6 7lht-a1-m1-cA 1795 68 0.1959 0.0106 0.2794 0.89 7lht-a1-m1-cA_7lht-a1-m1-cB
7 6onm-a1-m2-cA 497 69 0.1649 0.0322 0.2319 0.91 6onm-a1-m1-cA_6onm-a1-m2-cA
8 6onm-a1-m1-cA 497 69 0.1649 0.0322 0.2319 0.91 6onm-a1-m1-cA_6onm-a1-m2-cA
9 1t06-a1-m1-cB 235 32 0.1031 0.0426 0.3125 2.0 1t06-a1-m1-cA_1t06-a1-m1-cB
10 1t06-a1-m1-cA 235 32 0.1031 0.0426 0.3125 2.0 1t06-a1-m1-cA_1t06-a1-m1-cB
11 7khs-a2-m1-cC 427 49 0.1546 0.0351 0.3061 3.4 7khs-a2-m1-cC_7khs-a2-m1-cD
12 2xsa-a1-m2-cA 443 49 0.1546 0.0339 0.3061 3.4 2xsa-a1-m1-cA_2xsa-a1-m2-cA
13 2xsa-a1-m1-cA 443 49 0.1546 0.0339 0.3061 3.4 2xsa-a1-m1-cA_2xsa-a1-m2-cA
14 7khs-a2-m1-cD 448 49 0.1546 0.0335 0.3061 3.4 7khs-a2-m1-cC_7khs-a2-m1-cD
15 7x7n-a1-m1-cI 36 28 0.0825 0.2222 0.2857 4.1 7x7n-a1-m1-cH_7x7n-a1-m1-cI
16 7x7n-a1-m1-cH 36 28 0.0825 0.2222 0.2857 4.1 7x7n-a1-m1-cH_7x7n-a1-m1-cI
17 7x7n-a1-m1-cG 36 28 0.0825 0.2222 0.2857 4.1 7x7n-a1-m1-cF_7x7n-a1-m1-cG
18 7x7n-a1-m1-cF 36 28 0.0825 0.2222 0.2857 4.1 7x7n-a1-m1-cF_7x7n-a1-m1-cG
19 3ghg-a2-m1-cI 394 29 0.1031 0.0254 0.3448 4.5 3ghg-a2-m1-cL_3ghg-a2-m1-cI
20 3ghg-a2-m1-cL 391 29 0.1031 0.0256 0.3448 4.7 3ghg-a2-m1-cL_3ghg-a2-m1-cI
21 2qga-a1-m2-cC 455 66 0.1753 0.0374 0.2576 5.5 2qga-a1-m1-cB_2qga-a1-m2-cC, 2qga-a1-m1-cC_2qga-a1-m2-cC, 2qga-a1-m2-cB_2qga-a1-m2-cC
22 2qga-a1-m1-cC 455 66 0.1753 0.0374 0.2576 5.5 2qga-a1-m1-cC_2qga-a1-m2-cC
23 2qga-a1-m2-cB 454 66 0.1753 0.0374 0.2576 5.7 2qga-a1-m2-cB_2qga-a1-m2-cC
24 2qga-a1-m1-cB 454 66 0.1753 0.0374 0.2576 5.7 2qga-a1-m1-cB_2qga-a1-m2-cC

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Reference:
Jacob Schwartz et al.

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