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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
KLNQNQDISQLFHDEVPLFDNSITSKDKEVIETLSEIYSIVITLDHVEKAYLKDSIDDTQ
YTNTVDKLLKQFKVYLNSQNKEESNAITRLER

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2p22-a4-m2-cB 92 92 1.0000 1.0000 1.0000 1.37e-61 2p22-a4-m1-cB_2p22-a4-m2-cB
2 2p22-a4-m1-cB 92 92 1.0000 1.0000 1.0000 1.37e-61 2p22-a4-m1-cB_2p22-a4-m2-cB
3 2f66-a3-m1-cE 111 103 0.9130 0.7568 0.8155 5.90e-51 2f66-a3-m1-cB_2f66-a3-m1-cE
4 2f66-a3-m1-cB 111 103 0.9130 0.7568 0.8155 5.90e-51 2f66-a3-m1-cB_2f66-a3-m1-cE
5 3ubc-a1-m1-cG 131 76 0.2065 0.1450 0.2500 0.030 3ubc-a1-m1-cA_3ubc-a1-m1-cG
6 3ubc-a1-m1-cD 131 76 0.2065 0.1450 0.2500 0.030 3ubc-a1-m1-cA_3ubc-a1-m1-cD
7 3ubc-a1-m1-cA 131 76 0.2065 0.1450 0.2500 0.030 3ubc-a1-m1-cA_3ubc-a1-m1-cD, 3ubc-a1-m1-cA_3ubc-a1-m1-cG
8 7qq6-a1-m1-cB 275 71 0.1957 0.0655 0.2535 0.19 7qq6-a1-m1-cA_7qq6-a1-m1-cB
9 7qq6-a1-m1-cA 269 71 0.1957 0.0669 0.2535 0.37 7qq6-a1-m1-cA_7qq6-a1-m1-cB
10 6sl3-a1-m2-cA 618 86 0.2609 0.0388 0.2791 4.8 6sl3-a1-m1-cA_6sl3-a1-m2-cA
11 6sl3-a1-m1-cA 618 86 0.2609 0.0388 0.2791 4.8 6sl3-a1-m1-cA_6sl3-a1-m2-cA
12 7xdu-a1-m1-cA 346 73 0.1957 0.0520 0.2466 9.1 7xdu-a1-m1-cA_7xdu-a1-m1-cB
13 7xdu-a1-m1-cB 348 73 0.1957 0.0517 0.2466 9.1 7xdu-a1-m1-cA_7xdu-a1-m1-cB
14 8dk1-a1-m1-cG 176 37 0.1522 0.0795 0.3784 9.4 8dk1-a1-m1-cG_8dk1-a1-m1-cH

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Reference:
Jacob Schwartz et al.

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