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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
KLSPADKLKNISSLEEIVEDTTVPRNIRAAADNAKNALHNEEQELIVRSATAIQYLDDIS
EDPNPIHTRTQIWGIVSELETIK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2qzg-a2-m1-cB 88 83 1.0000 0.9432 1.0000 8.60e-56 2qzg-a2-m1-cD_2qzg-a2-m1-cB
2 2qzg-a2-m1-cD 83 83 1.0000 1.0000 1.0000 1.24e-55 2qzg-a2-m1-cD_2qzg-a2-m1-cB
3 7kfu-a1-m1-cF 332 32 0.1084 0.0271 0.2812 2.5 7kfu-a1-m1-cF_7kfu-a1-m1-cC, 7kfu-a1-m1-cF_7kfu-a1-m1-cE
4 1y2m-a1-m1-cC 651 83 0.2651 0.0338 0.2651 2.9 1y2m-a1-m1-cC_1y2m-a1-m1-cB
5 7kfu-a1-m1-cE 909 32 0.1084 0.0099 0.2812 3.5 7kfu-a1-m1-cF_7kfu-a1-m1-cE
6 7kfu-a1-m1-cC 909 32 0.1084 0.0099 0.2812 3.5 7kfu-a1-m1-cF_7kfu-a1-m1-cC
7 3iyk-a1-m9-cK 141 52 0.1807 0.1064 0.2885 5.3 3iyk-a1-m9-cI_3iyk-a1-m9-cK
8 3iyk-a1-m9-cI 141 52 0.1807 0.1064 0.2885 5.3 3iyk-a1-m9-cI_3iyk-a1-m9-cK
9 5o6u-a1-m1-cC 267 45 0.2048 0.0637 0.3778 6.7 5o6u-a1-m1-cC_5o6u-a1-m1-cE
10 5o6u-a1-m1-cE 315 45 0.2048 0.0540 0.3778 6.9 5o6u-a1-m1-cC_5o6u-a1-m1-cE

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Reference:
Jacob Schwartz et al.

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