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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=27)
KLSQLQTELLAALLESGLSKEALIQAL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1g39-a4-m2-cD 30 27 1.0000 0.9000 1.0000 3.57e-10 1g39-a4-m2-cB_1g39-a4-m2-cD
2 1g39-a4-m2-cB 30 27 1.0000 0.9000 1.0000 3.57e-10 1g39-a4-m2-cB_1g39-a4-m2-cD
3 1f93-a2-m1-cG 27 27 1.0000 1.0000 1.0000 4.03e-10 1f93-a2-m1-cH_1f93-a2-m1-cG
4 1f93-a2-m1-cH 26 26 0.9630 1.0000 1.0000 2.50e-09 1f93-a2-m1-cH_1f93-a2-m1-cG
5 2vsw-a3-m2-cB 134 24 0.4815 0.0970 0.5417 1.9 2vsw-a3-m1-cB_2vsw-a3-m2-cB
6 2vsw-a3-m1-cB 134 24 0.4815 0.0970 0.5417 1.9 2vsw-a3-m1-cB_2vsw-a3-m2-cB
7 2vsw-a1-m2-cB 134 24 0.4815 0.0970 0.5417 1.9 2vsw-a1-m2-cA_2vsw-a1-m2-cB
8 2vsw-a1-m2-cA 134 24 0.4815 0.0970 0.5417 1.9 2vsw-a1-m2-cA_2vsw-a1-m2-cB
9 3tg3-a2-m1-cC 128 24 0.4815 0.1016 0.5417 1.9 3tg3-a2-m1-cB_3tg3-a2-m1-cC
10 3tg3-a2-m1-cB 128 24 0.4815 0.1016 0.5417 2.1 3tg3-a2-m1-cB_3tg3-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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