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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
KLSYTSFVQVEDERSVVSEVVIRDDGVLRVYTKDGRVYEVDAPWAVNDSQLIEKLVSKGI
KVSGER

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4q0f-a1-m2-cC 66 66 1.0000 1.0000 1.0000 1.83e-41 4q0f-a1-m1-cC_4q0f-a1-m2-cC
2 4q0f-a1-m1-cC 66 66 1.0000 1.0000 1.0000 1.83e-41 4q0f-a1-m1-cC_4q0f-a1-m2-cC
3 4m8a-a1-m2-cB 68 67 1.0000 0.9706 0.9851 9.44e-40 4m8a-a1-m2-cA_4m8a-a1-m2-cB
4 4m8a-a1-m2-cA 67 66 0.9848 0.9701 0.9848 5.45e-39 4m8a-a1-m1-cA_4m8a-a1-m2-cA, 4m8a-a1-m2-cA_4m8a-a1-m2-cB
5 4m8a-a1-m1-cA 67 66 0.9848 0.9701 0.9848 5.45e-39 4m8a-a1-m1-cA_4m8a-a1-m2-cA
6 5vl1-a5-m1-cA 486 44 0.2273 0.0309 0.3409 2.7 5vl1-a5-m1-cB_5vl1-a5-m1-cA
7 5vl1-a5-m1-cB 485 44 0.2273 0.0309 0.3409 2.9 5vl1-a5-m1-cB_5vl1-a5-m1-cA
8 2hcm-a1-m2-cA 159 18 0.1364 0.0566 0.5000 5.7 2hcm-a1-m1-cA_2hcm-a1-m2-cA
9 2hcm-a1-m1-cA 159 18 0.1364 0.0566 0.5000 5.7 2hcm-a1-m1-cA_2hcm-a1-m2-cA
10 7qi8-a1-m2-cA 462 32 0.1667 0.0238 0.3438 6.2 7qi8-a1-m1-cA_7qi8-a1-m2-cA
11 7qi8-a1-m1-cA 462 32 0.1667 0.0238 0.3438 6.2 7qi8-a1-m1-cA_7qi8-a1-m2-cA
12 3bm3-a1-m1-cB 256 30 0.1818 0.0469 0.4000 6.5 3bm3-a1-m1-cB_3bm3-a1-m1-cA
13 3bm3-a1-m1-cA 257 30 0.1818 0.0467 0.4000 6.9 3bm3-a1-m1-cB_3bm3-a1-m1-cA
14 6n7f-a2-m1-cC 450 31 0.2121 0.0311 0.4516 8.2 6n7f-a2-m1-cC_6n7f-a2-m1-cD
15 6n7f-a2-m1-cD 451 31 0.2121 0.0310 0.4516 8.2 6n7f-a2-m1-cC_6n7f-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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