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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
KLTLPAELPDEQDLRAVLAYNMRLFRVNKGWSQEELARQCGLDRTYVSAVERKRWNIALS
NIEKMAAALGVAAYQLLLPPQERLKLM

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3vk0-a2-m1-cC 88 87 1.0000 0.9886 1.0000 1.24e-59 3vk0-a2-m1-cB_3vk0-a2-m1-cC
2 3vk0-a2-m1-cB 87 87 1.0000 1.0000 1.0000 1.65e-59 3vk0-a2-m1-cB_3vk0-a2-m1-cC
3 2b5a-a2-m1-cD 76 75 0.3448 0.3947 0.4000 2.08e-12 2b5a-a2-m1-cC_2b5a-a2-m1-cD
4 2b5a-a2-m1-cC 76 75 0.3448 0.3947 0.4000 2.08e-12 2b5a-a2-m1-cC_2b5a-a2-m1-cD
5 1y7y-a1-m1-cA 69 56 0.3103 0.3913 0.4821 9.91e-11 1y7y-a1-m1-cB_1y7y-a1-m1-cA
6 1y7y-a1-m1-cB 66 56 0.3103 0.4091 0.4821 1.09e-10 1y7y-a1-m1-cB_1y7y-a1-m1-cA
7 3zkc-a1-m1-cB 63 57 0.2299 0.3175 0.3509 8.79e-07 3zkc-a1-m1-cA_3zkc-a1-m1-cB
8 3zkc-a1-m1-cA 61 57 0.2299 0.3279 0.3509 9.27e-07 3zkc-a1-m1-cA_3zkc-a1-m1-cB
9 1b0n-a6-m3-cA 103 69 0.2529 0.2136 0.3188 1.00e-06 1b0n-a6-m1-cA_1b0n-a6-m3-cA
10 1b0n-a6-m1-cA 103 69 0.2529 0.2136 0.3188 1.00e-06 1b0n-a6-m1-cA_1b0n-a6-m3-cA
11 1b0n-a5-m2-cA 103 69 0.2529 0.2136 0.3188 1.00e-06 1b0n-a5-m1-cA_1b0n-a5-m2-cA
12 1b0n-a5-m1-cA 103 69 0.2529 0.2136 0.3188 1.00e-06 1b0n-a5-m1-cA_1b0n-a5-m2-cA
13 3kxa-a2-m1-cD 127 48 0.1954 0.1339 0.3542 5.58e-05 3kxa-a2-m1-cD_3kxa-a2-m1-cC
14 3kxa-a2-m1-cC 128 48 0.1954 0.1328 0.3542 5.71e-05 3kxa-a2-m1-cD_3kxa-a2-m1-cC
15 3f51-a3-m1-cF 93 65 0.2299 0.2151 0.3077 0.001 3f51-a3-m1-cD_3f51-a3-m1-cF
16 3f51-a3-m1-cD 93 65 0.2299 0.2151 0.3077 0.002 3f51-a3-m1-cD_3f51-a3-m1-cF
17 6jq1-a1-m1-cA 129 60 0.1954 0.1318 0.2833 0.002 6jq1-a1-m1-cA_6jq1-a1-m1-cB
18 6jq1-a1-m1-cB 130 60 0.1954 0.1308 0.2833 0.002 6jq1-a1-m1-cA_6jq1-a1-m1-cB
19 6rmq-a2-m3-cB 121 60 0.1839 0.1322 0.2667 0.043 6rmq-a2-m1-cB_6rmq-a2-m3-cB
20 6rmq-a2-m1-cB 121 60 0.1839 0.1322 0.2667 0.043 6rmq-a2-m1-cB_6rmq-a2-m3-cB
21 4o8b-a1-m2-cA 101 75 0.2414 0.2079 0.2800 0.12 4o8b-a1-m1-cA_4o8b-a1-m2-cA
22 4o8b-a1-m1-cA 101 75 0.2414 0.2079 0.2800 0.12 4o8b-a1-m1-cA_4o8b-a1-m2-cA
23 6af4-a2-m1-cF 91 60 0.1839 0.1758 0.2667 0.21 6af4-a2-m1-cF_6af4-a2-m1-cD
24 6af4-a2-m1-cD 92 60 0.1839 0.1739 0.2667 0.22 6af4-a2-m1-cF_6af4-a2-m1-cD
25 2b7y-a1-m1-cC 181 51 0.1609 0.0773 0.2745 1.2 2b7y-a1-m1-cA_2b7y-a1-m1-cC
26 2b7y-a1-m1-cA 181 51 0.1609 0.0773 0.2745 1.2 2b7y-a1-m1-cA_2b7y-a1-m1-cC
27 6jyi-a1-m1-cB 159 48 0.1264 0.0692 0.2292 2.6 6jyi-a1-m1-cB_6jyi-a1-m1-cA
28 6jyi-a1-m1-cA 166 48 0.1264 0.0663 0.2292 2.6 6jyi-a1-m1-cB_6jyi-a1-m1-cA
29 6b9r-a2-m1-cC 446 66 0.2644 0.0516 0.3485 4.5 6b9r-a2-m1-cB_6b9r-a2-m1-cC
30 6b9r-a2-m1-cB 442 66 0.2644 0.0520 0.3485 4.6 6b9r-a2-m1-cB_6b9r-a2-m1-cC
31 2i33-a1-m1-cA 238 45 0.1379 0.0504 0.2667 5.1 2i33-a1-m1-cB_2i33-a1-m1-cA
32 6hlk-a1-m2-cA 127 18 0.1264 0.0866 0.6111 6.9 6hlk-a1-m1-cA_6hlk-a1-m2-cA
33 6hlk-a1-m1-cA 127 18 0.1264 0.0866 0.6111 6.9 6hlk-a1-m1-cA_6hlk-a1-m2-cA
34 5w1x-a3-m1-cM 422 60 0.2184 0.0450 0.3167 7.8 5w1x-a3-m1-cK_5w1x-a3-m1-cM
35 5w1x-a3-m1-cK 422 60 0.2184 0.0450 0.3167 7.8 5w1x-a3-m1-cK_5w1x-a3-m1-cM
36 5w1x-a2-m1-cJ 422 60 0.2184 0.0450 0.3167 7.8 5w1x-a2-m1-cI_5w1x-a2-m1-cJ
37 5w1x-a2-m1-cI 422 60 0.2184 0.0450 0.3167 7.8 5w1x-a2-m1-cI_5w1x-a2-m1-cJ

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Reference:
Jacob Schwartz et al.

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