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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
KLYKNIEIDTDTHSVYIHKILLNLTLTEYKIISFMIDQPHKVFTRGELMNHCMNSDALER
TVDSHVSKLRKKLEEQGIFQMLINVRGVGYRLDNP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5x5l-a1-m1-cA 95 95 1.0000 1.0000 1.0000 1.81e-67 5x5l-a1-m1-cA_5x5l-a1-m1-cE
2 5x5l-a1-m1-cE 98 97 0.9895 0.9592 0.9691 4.18e-64 5x5l-a1-m1-cA_5x5l-a1-m1-cE
3 7e1f-a1-m1-cA 95 91 0.3789 0.3789 0.3956 1.92e-12 7e1f-a1-m1-cB_7e1f-a1-m1-cA
4 7e1f-a1-m1-cB 93 91 0.3789 0.3871 0.3956 1.93e-12 7e1f-a1-m1-cB_7e1f-a1-m1-cA
5 7e1b-a2-m1-cH 208 91 0.3684 0.1683 0.3846 4.40e-12 7e1b-a2-m1-cF_7e1b-a2-m1-cH, 7e1b-a2-m1-cH_7e1b-a2-m1-cE
6 7e1b-a2-m1-cF 208 91 0.3684 0.1683 0.3846 4.40e-12 7e1b-a2-m1-cF_7e1b-a2-m1-cH
7 7e1b-a1-m1-cD 208 91 0.3684 0.1683 0.3846 4.69e-12 7e1b-a1-m1-cD_7e1b-a1-m1-cC
8 7e1b-a1-m1-cC 209 91 0.3684 0.1675 0.3846 5.00e-12 7e1b-a1-m1-cD_7e1b-a1-m1-cC
9 7e1b-a2-m1-cE 209 91 0.3684 0.1675 0.3846 5.05e-12 7e1b-a2-m1-cH_7e1b-a2-m1-cE
10 4b09-a1-m1-cB 214 76 0.3158 0.1402 0.3947 7.48e-11 4b09-a1-m1-cB_4b09-a1-m1-cA
11 4b09-a1-m1-cA 216 76 0.3158 0.1389 0.3947 7.56e-11 4b09-a1-m1-cB_4b09-a1-m1-cA
12 2pmu-a1-m1-cD 96 93 0.2947 0.2917 0.3011 8.40e-11 2pmu-a1-m1-cC_2pmu-a1-m1-cD
13 2oqr-a1-m2-cA 226 91 0.2842 0.1195 0.2967 3.51e-10 2oqr-a1-m1-cA_2oqr-a1-m2-cA
14 2oqr-a1-m1-cA 226 91 0.2842 0.1195 0.2967 3.51e-10 2oqr-a1-m1-cA_2oqr-a1-m2-cA
15 2pmu-a1-m1-cC 92 93 0.2842 0.2935 0.2903 7.64e-09 2pmu-a1-m1-cC_2pmu-a1-m1-cD
16 5u8m-a1-m1-cB 229 92 0.3158 0.1310 0.3261 9.45e-09 5u8m-a1-m1-cA_5u8m-a1-m1-cB
17 5u8m-a1-m1-cA 229 92 0.3158 0.1310 0.3261 9.45e-09 5u8m-a1-m1-cA_5u8m-a1-m1-cB
18 3q9v-a1-m1-cA 98 73 0.2737 0.2653 0.3562 1.46e-08 3q9v-a1-m1-cA_3q9v-a1-m2-cB
19 3q9v-a1-m2-cB 99 73 0.2737 0.2626 0.3562 1.55e-08 3q9v-a1-m1-cA_3q9v-a1-m2-cB
20 5ed4-a2-m1-cF 214 95 0.2947 0.1308 0.2947 2.07e-08 5ed4-a2-m1-cF_5ed4-a2-m1-cE
21 3r0j-a1-m1-cB 218 95 0.2947 0.1284 0.2947 2.10e-08 3r0j-a1-m1-cB_3r0j-a1-m1-cA
22 3r0j-a1-m1-cA 221 95 0.2947 0.1267 0.2947 2.23e-08 3r0j-a1-m1-cB_3r0j-a1-m1-cA
23 5ed4-a2-m1-cE 224 95 0.2947 0.1250 0.2947 2.39e-08 5ed4-a2-m1-cF_5ed4-a2-m1-cE
24 6kyx-a1-m2-cA 100 87 0.2947 0.2800 0.3218 5.51e-08 6kyx-a1-m1-cA_6kyx-a1-m2-cA
25 6kyx-a1-m1-cA 100 87 0.2947 0.2800 0.3218 5.51e-08 6kyx-a1-m1-cA_6kyx-a1-m2-cA
26 6lxn-a1-m1-cB 101 91 0.2421 0.2277 0.2527 7.25e-07 6lxn-a1-m1-cB_6lxn-a1-m1-cA
27 6lxm-a2-m1-cB 101 91 0.2421 0.2277 0.2527 7.25e-07 6lxm-a2-m1-cA_6lxm-a2-m1-cB
28 6lxm-a2-m1-cA 100 91 0.2421 0.2300 0.2527 7.67e-07 6lxm-a2-m1-cA_6lxm-a2-m1-cB
29 5dcm-a1-m1-cA 97 74 0.2632 0.2577 0.3378 7.97e-07 5dcm-a1-m1-cA_5dcm-a1-m1-cB
30 6lxn-a1-m1-cA 110 91 0.2421 0.2091 0.2527 1.40e-06 6lxn-a1-m1-cB_6lxn-a1-m1-cA
31 6zwt-a2-m1-cD 99 89 0.2737 0.2626 0.2921 1.69e-06 6zwt-a2-m1-cB_6zwt-a2-m1-cD
32 6zwt-a2-m1-cB 99 89 0.2737 0.2626 0.2921 1.69e-06 6zwt-a2-m1-cB_6zwt-a2-m1-cD
33 5dcm-a1-m1-cB 98 73 0.2632 0.2551 0.3425 3.09e-06 5dcm-a1-m1-cA_5dcm-a1-m1-cB
34 5za3-a1-m1-cA 101 72 0.2316 0.2178 0.3056 0.019 5za3-a1-m1-cB_5za3-a1-m1-cA
35 5za3-a1-m1-cB 100 72 0.2316 0.2200 0.3056 0.019 5za3-a1-m1-cB_5za3-a1-m1-cA
36 4nhj-a1-m1-cA 102 91 0.2211 0.2059 0.2308 0.35 4nhj-a1-m1-cB_4nhj-a1-m1-cA
37 4nhj-a1-m1-cB 101 91 0.2211 0.2079 0.2308 0.39 4nhj-a1-m1-cB_4nhj-a1-m1-cA
38 3r38-a2-m3-cA 438 73 0.2421 0.0525 0.3151 6.2 3r38-a2-m1-cA_3r38-a2-m3-cA
39 3r38-a2-m1-cA 438 73 0.2421 0.0525 0.3151 6.2 3r38-a2-m1-cA_3r38-a2-m3-cA
40 3r38-a1-m2-cA 438 73 0.2421 0.0525 0.3151 6.2 3r38-a1-m1-cA_3r38-a1-m2-cA
41 3r38-a1-m1-cA 438 73 0.2421 0.0525 0.3151 6.2 3r38-a1-m1-cA_3r38-a1-m2-cA
42 8ffu-a2-m1-cC 358 59 0.2000 0.0531 0.3220 9.6 8ffu-a2-m1-cD_8ffu-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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