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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
KMKVKATKGEGDGGITSEGNALYNNAFMYAYVTTKPGMKYVKWEHDSGVVTVELEPPCRF
VIDTPTGPQIKYLYFVKNLNNLRRGAVLGYIGATVRLQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2j97-a1-m2-cA 98 98 1.0000 1.0000 1.0000 5.25e-70 2j97-a1-m1-cA_2j97-a1-m2-cA
2 2j97-a1-m1-cA 98 98 1.0000 1.0000 1.0000 5.25e-70 2j97-a1-m1-cA_2j97-a1-m2-cA
3 2j98-a1-m1-cA 106 101 0.9796 0.9057 0.9505 3.36e-65 2j98-a1-m1-cB_2j98-a1-m1-cA
4 2j98-a1-m1-cB 102 99 0.9592 0.9216 0.9495 1.26e-63 2j98-a1-m1-cB_2j98-a1-m1-cA
5 5hiz-a1-m1-cB 96 99 0.6122 0.6250 0.6061 1.60e-36 5hiz-a1-m1-cA_5hiz-a1-m1-cB
6 5hiz-a1-m1-cA 96 99 0.6122 0.6250 0.6061 1.60e-36 5hiz-a1-m1-cA_5hiz-a1-m1-cB
7 8dqu-a1-m6-cC 78 72 0.3265 0.4103 0.4444 3.87e-13 8dqu-a1-m6-cF_8dqu-a1-m6-cC
8 8dqu-a1-m6-cF 74 70 0.3061 0.4054 0.4286 1.20e-11 8dqu-a1-m6-cF_8dqu-a1-m6-cC
9 5c94-a1-m2-cA 116 79 0.2551 0.2155 0.3165 4.28e-10 5c94-a1-m1-cA_5c94-a1-m2-cA
10 5c94-a1-m1-cA 116 79 0.2551 0.2155 0.3165 4.28e-10 5c94-a1-m1-cA_5c94-a1-m2-cA
11 5ym6-a2-m1-cD 95 67 0.2347 0.2421 0.3433 1.24e-08 5ym6-a2-m1-cD_5ym6-a2-m1-cC
12 5ym6-a2-m1-cC 99 67 0.2347 0.2323 0.3433 5.20e-07 5ym6-a2-m1-cD_5ym6-a2-m1-cC
13 3tgo-a4-m2-cB 218 36 0.1327 0.0596 0.3611 2.8 3tgo-a4-m1-cA_3tgo-a4-m2-cB, 3tgo-a4-m1-cB_3tgo-a4-m2-cB
14 3tgo-a4-m1-cB 218 36 0.1327 0.0596 0.3611 2.8 3tgo-a4-m1-cB_3tgo-a4-m2-cB
15 3tgo-a4-m1-cA 217 36 0.1327 0.0599 0.3611 2.9 3tgo-a4-m1-cA_3tgo-a4-m2-cB
16 4or2-a1-m1-cB 366 44 0.1633 0.0437 0.3636 3.8 4or2-a1-m1-cA_4or2-a1-m1-cB
17 4or2-a1-m1-cA 360 44 0.1633 0.0444 0.3636 3.9 4or2-a1-m1-cA_4or2-a1-m1-cB
18 6szi-a1-m1-cA 1276 33 0.1122 0.0086 0.3333 6.2 6szi-a1-m1-cB_6szi-a1-m1-cA
19 6szi-a1-m1-cB 1185 33 0.1122 0.0093 0.3333 6.5 6szi-a1-m1-cB_6szi-a1-m1-cA
20 1k8t-a2-m2-cA 498 65 0.1939 0.0382 0.2923 6.7 1k8t-a2-m1-cA_1k8t-a2-m2-cA
21 1k8t-a2-m1-cA 498 65 0.1939 0.0382 0.2923 6.7 1k8t-a2-m1-cA_1k8t-a2-m2-cA
22 1k90-a1-m1-cC 503 65 0.1939 0.0378 0.2923 7.1 1k90-a1-m1-cA_1k90-a1-m1-cC
23 2qs8-a4-m1-cB 393 29 0.1327 0.0331 0.4483 7.2 2qs8-a4-m1-cB_2qs8-a4-m1-cA
24 2qs8-a3-m4-cB 393 29 0.1327 0.0331 0.4483 7.2 2qs8-a3-m2-cB_2qs8-a3-m4-cB, 2qs8-a3-m4-cB_2qs8-a3-m2-cA
25 2qs8-a3-m2-cB 393 29 0.1327 0.0331 0.4483 7.2 2qs8-a3-m2-cB_2qs8-a3-m4-cB
26 2qs8-a4-m1-cA 394 29 0.1327 0.0330 0.4483 7.5 2qs8-a4-m1-cB_2qs8-a4-m1-cA
27 2qs8-a3-m2-cA 394 29 0.1327 0.0330 0.4483 7.5 2qs8-a3-m4-cB_2qs8-a3-m2-cA

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Reference:
Jacob Schwartz et al.

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