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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
KNIKIRLVTGEDIIGNISESQGLITIKKAFVIIPQGKPVQLVLSPWQPYTDDKEIVIDDS
KVITITSPKDDIIKSYESHTSEII

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3by7-a1-m1-cD 84 84 1.0000 1.0000 1.0000 4.68e-54 3by7-a1-m1-cB_3by7-a1-m1-cD
2 3by7-a1-m1-cB 79 81 0.9405 1.0000 0.9753 9.45e-49 3by7-a1-m1-cB_3by7-a1-m1-cD
3 7xm1-a1-m1-cZA 123 81 0.8810 0.6016 0.9136 2.76e-44 7xm1-a1-m1-cHA_7xm1-a1-m1-cZA
4 7xm1-a1-m1-cHA 123 81 0.8810 0.6016 0.9136 2.76e-44 7xm1-a1-m1-cHA_7xm1-a1-m1-cZA
5 3bwn-a1-m1-cA 362 29 0.1429 0.0331 0.4138 2.5 3bwn-a1-m1-cA_3bwn-a1-m1-cB
6 3idf-a1-m1-cA 138 21 0.1071 0.0652 0.4286 5.0 3idf-a1-m1-cB_3idf-a1-m1-cA
7 3idf-a1-m1-cB 135 21 0.1071 0.0667 0.4286 5.2 3idf-a1-m1-cB_3idf-a1-m1-cA
8 2eg4-a3-m1-cA 230 29 0.1310 0.0478 0.3793 7.8 2eg4-a3-m1-cB_2eg4-a3-m1-cA
9 2eg4-a3-m1-cB 228 29 0.1310 0.0482 0.3793 7.8 2eg4-a3-m1-cB_2eg4-a3-m1-cA
10 2w90-a1-m1-cB 471 52 0.1548 0.0276 0.2500 8.5 2w90-a1-m1-cA_2w90-a1-m1-cB
11 2w90-a1-m1-cA 470 52 0.1548 0.0277 0.2500 8.9 2w90-a1-m1-cA_2w90-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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