Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
KNRGCVLTAIHLNVTDLGLGYETKEELIFRYCSGSCEAAETMYDKILKNLSRSRRLTSVG
QACCRPVAFDDDLSFLDDSLVYHILRKHSAKRCGCI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1agq-a1-m1-cB 96 96 1.0000 1.0000 1.0000 1.32e-67 1agq-a1-m1-cA_1agq-a1-m1-cB
2 1agq-a1-m1-cA 91 95 0.9479 1.0000 0.9579 7.78e-62 1agq-a1-m1-cA_1agq-a1-m1-cB
3 3fub-a1-m2-cB 92 93 0.8958 0.9348 0.9247 2.32e-49 3fub-a1-m1-cB_3fub-a1-m2-cB
4 3fub-a1-m1-cB 92 93 0.8958 0.9348 0.9247 2.32e-49 3fub-a1-m1-cB_3fub-a1-m2-cB
5 6q2n-a1-m1-cB 86 92 0.8438 0.9419 0.8804 3.82e-45 6q2n-a1-m1-cA_6q2n-a1-m1-cB
6 6q2n-a1-m1-cA 86 92 0.8438 0.9419 0.8804 3.82e-45 6q2n-a1-m1-cA_6q2n-a1-m1-cB
7 7ab8-a1-m2-cB 98 98 0.6771 0.6633 0.6633 7.94e-45 7ab8-a1-m1-cB_7ab8-a1-m2-cB
8 7ab8-a1-m1-cB 98 98 0.6771 0.6633 0.6633 7.94e-45 7ab8-a1-m1-cB_7ab8-a1-m2-cB
9 5nmz-a1-m1-cB 99 97 0.4375 0.4242 0.4330 1.71e-21 5nmz-a1-m1-cB_5nmz-a1-m1-cA
10 5nmz-a1-m1-cA 101 97 0.4375 0.4158 0.4330 1.84e-21 5nmz-a1-m1-cB_5nmz-a1-m1-cA
11 2ask-a3-m3-cB 101 100 0.3750 0.3564 0.3600 1.11e-13 2ask-a3-m3-cA_2ask-a3-m3-cB
12 2ask-a3-m3-cA 101 100 0.3750 0.3564 0.3600 1.11e-13 2ask-a3-m3-cA_2ask-a3-m3-cB
13 2ask-a2-m2-cB 101 100 0.3750 0.3564 0.3600 1.11e-13 2ask-a2-m1-cA_2ask-a2-m2-cB
14 2ask-a2-m1-cA 101 100 0.3750 0.3564 0.3600 1.11e-13 2ask-a2-m1-cA_2ask-a2-m2-cB
15 1uby-a2-m3-cA 348 99 0.3125 0.0862 0.3030 1.1 1uby-a2-m1-cA_1uby-a2-m3-cA
16 1uby-a2-m1-cA 348 99 0.3125 0.0862 0.3030 1.1 1uby-a2-m1-cA_1uby-a2-m3-cA
17 1uby-a1-m2-cA 348 99 0.3125 0.0862 0.3030 1.1 1uby-a1-m1-cA_1uby-a1-m2-cA
18 1uby-a1-m1-cA 348 99 0.3125 0.0862 0.3030 1.1 1uby-a1-m1-cA_1uby-a1-m2-cA
19 3eya-a3-m1-cJ 522 31 0.1354 0.0249 0.4194 1.2 3eya-a3-m1-cJ_3eya-a3-m1-cL
20 3eya-a3-m1-cL 523 31 0.1354 0.0249 0.4194 1.2 3eya-a3-m1-cI_3eya-a3-m1-cL, 3eya-a3-m1-cJ_3eya-a3-m1-cL, 3eya-a3-m1-cK_3eya-a3-m1-cL
21 3eya-a3-m1-cK 523 31 0.1354 0.0249 0.4194 1.2 3eya-a3-m1-cK_3eya-a3-m1-cL
22 3eya-a3-m1-cI 523 31 0.1354 0.0249 0.4194 1.2 3eya-a3-m1-cI_3eya-a3-m1-cL
23 5jhw-a1-m1-cB 109 70 0.1875 0.1651 0.2571 9.1 5jhw-a1-m1-cA_5jhw-a1-m1-cB
24 5jhw-a1-m1-cA 109 70 0.1875 0.1651 0.2571 9.1 5jhw-a1-m1-cA_5jhw-a1-m1-cB
25 5e4g-a1-m2-cA 108 70 0.1875 0.1667 0.2571 9.4 5e4g-a1-m1-cA_5e4g-a1-m2-cA
26 5e4g-a1-m1-cA 108 70 0.1875 0.1667 0.2571 9.4 5e4g-a1-m1-cA_5e4g-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600