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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=61)
KNSEMKINLRLEQFKKELVLYEQKKFKEYGMKIDEITKENKKLANEIGRLRERWDSLVES
A

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5kc1-a2-m1-cF 61 61 1.0000 1.0000 1.0000 9.38e-38 5kc1-a2-m1-cH_5kc1-a2-m1-cF
2 5kc1-a2-m1-cH 53 53 0.8689 1.0000 1.0000 5.79e-32 5kc1-a2-m1-cH_5kc1-a2-m1-cF
3 1q4t-a1-m2-cA 142 37 0.2459 0.1056 0.4054 0.20 1q4t-a1-m2-cB_1q4t-a1-m2-cA
4 1q4t-a1-m1-cA 142 37 0.2459 0.1056 0.4054 0.20 1q4t-a1-m2-cB_1q4t-a1-m1-cA
5 1q4t-a1-m2-cB 140 37 0.2459 0.1071 0.4054 0.20 1q4t-a1-m2-cB_1q4t-a1-m1-cA, 1q4t-a1-m2-cB_1q4t-a1-m2-cA
6 1q4u-a1-m2-cB 139 37 0.2459 0.1079 0.4054 0.20 1q4u-a1-m1-cB_1q4u-a1-m2-cB
7 1q4u-a1-m1-cB 139 37 0.2459 0.1079 0.4054 0.20 1q4u-a1-m1-cB_1q4u-a1-m2-cB
8 3ces-a2-m1-cD 507 58 0.2459 0.0296 0.2586 1.5 3ces-a2-m1-cD_3ces-a2-m1-cC
9 3ces-a2-m1-cC 516 40 0.1803 0.0213 0.2750 1.6 3ces-a2-m1-cD_3ces-a2-m1-cC
10 3fxu-a1-m2-cB 267 49 0.2623 0.0599 0.3265 1.7 3fxu-a1-m2-cB_3fxu-a1-m1-cA, 3fxu-a1-m2-cB_3fxu-a1-m2-cA
11 3fzj-a3-m2-cJ 296 20 0.1475 0.0304 0.4500 2.1 3fzj-a3-m1-cI_3fzj-a3-m2-cJ
12 3fzj-a3-m1-cI 296 20 0.1475 0.0304 0.4500 2.1 3fzj-a3-m1-cI_3fzj-a3-m2-cJ
13 3fzj-a2-m1-cH 296 20 0.1475 0.0304 0.4500 2.1 3fzj-a2-m1-cE_3fzj-a2-m1-cH
14 3fzj-a2-m1-cE 296 20 0.1475 0.0304 0.4500 2.1 3fzj-a2-m1-cE_3fzj-a2-m1-cH
15 3fxu-a1-m2-cA 296 20 0.1475 0.0304 0.4500 2.1 3fxu-a1-m2-cB_3fxu-a1-m2-cA
16 3fxu-a1-m1-cA 296 20 0.1475 0.0304 0.4500 2.1 3fxu-a1-m2-cB_3fxu-a1-m1-cA
17 3l4g-a2-m1-cH 589 24 0.1475 0.0153 0.3750 2.8 3l4g-a2-m1-cF_3l4g-a2-m1-cH
18 3l4g-a2-m1-cF 589 24 0.1475 0.0153 0.3750 2.8 3l4g-a2-m1-cF_3l4g-a2-m1-cH

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Reference:
Jacob Schwartz et al.

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