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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
KPDCTAARDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESTEYRRQ
VQSLTEVDALK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3trt-a1-m1-cA 73 71 1.0000 0.9726 1.0000 1.44e-46 3trt-a1-m1-cB_3trt-a1-m1-cA
2 3trt-a1-m1-cB 71 71 1.0000 1.0000 1.0000 1.89e-46 3trt-a1-m1-cB_3trt-a1-m1-cA
3 3klt-a3-m1-cC 71 71 0.9577 0.9577 0.9577 1.06e-39 3klt-a3-m1-cD_3klt-a3-m1-cC
4 3klt-a1-m1-cB 71 71 0.9577 0.9577 0.9577 4.38e-39 3klt-a1-m1-cD_3klt-a1-m1-cB
5 3klt-a1-m1-cA 71 71 0.9577 0.9577 0.9577 4.38e-39 3klt-a1-m1-cD_3klt-a1-m1-cA
6 3klt-a3-m1-cD 70 67 0.9155 0.9286 0.9701 1.29e-38 3klt-a3-m1-cD_3klt-a3-m1-cC
7 3klt-a1-m1-cD 70 67 0.9155 0.9286 0.9701 1.29e-38 3klt-a1-m1-cD_3klt-a1-m1-cA, 3klt-a1-m1-cD_3klt-a1-m1-cB
8 2oso-a1-m2-cA 152 38 0.1268 0.0592 0.2368 1.8 2oso-a1-m1-cA_2oso-a1-m2-cA
9 2oso-a1-m1-cA 152 38 0.1268 0.0592 0.2368 1.8 2oso-a1-m1-cA_2oso-a1-m2-cA
10 6zd0-a1-m1-cE 460 66 0.2394 0.0370 0.2576 2.1 6zd0-a1-m1-cA_6zd0-a1-m1-cE
11 6zd0-a1-m1-cA 460 66 0.2394 0.0370 0.2576 2.1 6zd0-a1-m1-cA_6zd0-a1-m1-cE
12 5imt-a1-m2-cA 460 66 0.2394 0.0370 0.2576 3.0 5imt-a1-m1-cA_5imt-a1-m2-cA
13 5imt-a1-m1-cA 460 66 0.2394 0.0370 0.2576 3.0 5imt-a1-m1-cA_5imt-a1-m2-cA
14 1s3r-a4-m2-cB 473 66 0.2394 0.0359 0.2576 3.6 1s3r-a4-m1-cA_1s3r-a4-m2-cB, 1s3r-a4-m1-cB_1s3r-a4-m2-cB, 1s3r-a4-m2-cA_1s3r-a4-m2-cB
15 1s3r-a4-m2-cA 473 66 0.2394 0.0359 0.2576 3.6 1s3r-a4-m2-cA_1s3r-a4-m2-cB
16 1s3r-a4-m1-cB 473 66 0.2394 0.0359 0.2576 3.6 1s3r-a4-m1-cB_1s3r-a4-m2-cB
17 1s3r-a4-m1-cA 473 66 0.2394 0.0359 0.2576 3.6 1s3r-a4-m1-cA_1s3r-a4-m2-cB
18 7x5d-a1-m2-cA 99 60 0.2254 0.1616 0.2667 5.2 7x5d-a1-m2-cB_7x5d-a1-m2-cA
19 7x5d-a1-m1-cA 99 60 0.2254 0.1616 0.2667 5.2 7x5d-a1-m2-cB_7x5d-a1-m1-cA
20 7x5d-a1-m2-cB 94 60 0.2254 0.1702 0.2667 6.9 7x5d-a1-m2-cB_7x5d-a1-m1-cA, 7x5d-a1-m2-cB_7x5d-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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