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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
KPEVIITYCTQCQWLLRAAWLAQELLSTFSDDLGKVSLEPATGGAFRITCDGVQIWERKA
DGGFPEAKVLKQRVRDQIDP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2obk-a2-m1-cE 80 80 1.0000 1.0000 1.0000 3.65e-55 2obk-a2-m1-cE_2obk-a2-m1-cH
2 2obk-a2-m1-cH 83 80 1.0000 0.9639 1.0000 3.91e-55 2obk-a2-m1-cE_2obk-a2-m1-cH
3 2obk-a1-m1-cB 85 80 1.0000 0.9412 1.0000 3.97e-55 2obk-a1-m1-cA_2obk-a1-m1-cB
4 2obk-a1-m1-cA 84 80 1.0000 0.9524 1.0000 4.30e-55 2obk-a1-m1-cA_2obk-a1-m1-cB
5 2oka-a1-m1-cD 84 80 0.8875 0.8452 0.8875 1.28e-50 2oka-a1-m1-cA_2oka-a1-m1-cD, 2oka-a1-m1-cC_2oka-a1-m1-cD
6 2oka-a1-m1-cC 84 80 0.8875 0.8452 0.8875 1.28e-50 2oka-a1-m1-cC_2oka-a1-m1-cD
7 2oka-a1-m1-cA 84 80 0.8875 0.8452 0.8875 1.28e-50 2oka-a1-m1-cA_2oka-a1-m1-cD
8 2ojl-a1-m2-cA 78 77 0.6750 0.6923 0.7013 2.64e-35 2ojl-a1-m2-cB_2ojl-a1-m2-cA
9 2ojl-a1-m1-cA 78 77 0.6750 0.6923 0.7013 2.64e-35 2ojl-a1-m2-cB_2ojl-a1-m1-cA
10 2p0g-a1-m1-cD 79 80 0.6750 0.6835 0.6750 2.77e-35 2p0g-a1-m1-cA_2p0g-a1-m1-cD, 2p0g-a1-m1-cC_2p0g-a1-m1-cD
11 2ojl-a1-m2-cB 76 77 0.6750 0.7105 0.7013 3.04e-35 2ojl-a1-m2-cB_2ojl-a1-m1-cA, 2ojl-a1-m2-cB_2ojl-a1-m2-cA
12 2p0g-a1-m1-cC 79 79 0.6625 0.6709 0.6709 2.04e-34 2p0g-a1-m1-cC_2p0g-a1-m1-cD
13 2fa8-a1-m1-cB 86 80 0.6750 0.6279 0.6750 2.09e-34 2fa8-a1-m1-cC_2fa8-a1-m1-cB
14 2p0g-a1-m1-cA 77 78 0.6500 0.6753 0.6667 1.54e-33 2p0g-a1-m1-cA_2p0g-a1-m1-cD
15 2fa8-a1-m1-cC 80 79 0.6625 0.6625 0.6709 1.99e-33 2fa8-a1-m1-cC_2fa8-a1-m1-cB, 2fa8-a1-m1-cC_2fa8-a1-m1-cD
16 2fa8-a1-m1-cD 80 78 0.6500 0.6500 0.6667 1.33e-32 2fa8-a1-m1-cC_2fa8-a1-m1-cD
17 3dex-a4-m1-cH 83 77 0.5000 0.4819 0.5195 5.32e-24 3dex-a4-m1-cG_3dex-a4-m1-cH
18 3dex-a4-m1-cG 77 75 0.4875 0.5065 0.5200 5.26e-23 3dex-a4-m1-cG_3dex-a4-m1-cH
19 1uf2-a1-m9-cT 421 35 0.1375 0.0261 0.3143 1.4 1uf2-a1-m54-cT_1uf2-a1-m9-cT, 1uf2-a1-m9-cG_1uf2-a1-m9-cT
20 1uf2-a1-m9-cE 421 35 0.1375 0.0261 0.3143 1.4 1uf2-a1-m9-cJ_1uf2-a1-m9-cE
21 1uf2-a1-m54-cT 421 35 0.1375 0.0261 0.3143 1.4 1uf2-a1-m54-cT_1uf2-a1-m9-cT
22 1uf2-a1-m9-cG 417 35 0.1375 0.0264 0.3143 1.4 1uf2-a1-m9-cG_1uf2-a1-m9-cT
23 1uf2-a1-m9-cJ 413 35 0.1375 0.0266 0.3143 1.5 1uf2-a1-m9-cJ_1uf2-a1-m9-cE
24 1uf2-a1-m9-cP 414 35 0.1375 0.0266 0.3143 1.5 1uf2-a1-m8-cP_1uf2-a1-m9-cP, 1uf2-a1-m9-cP_1uf2-a1-m10-cC
25 1uf2-a1-m8-cP 414 35 0.1375 0.0266 0.3143 1.5 1uf2-a1-m8-cP_1uf2-a1-m9-cP
26 1uf2-a1-m10-cC 415 35 0.1375 0.0265 0.3143 1.5 1uf2-a1-m9-cP_1uf2-a1-m10-cC

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Reference:
Jacob Schwartz et al.

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