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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
KPFGVNRGLDLDKILHCYQMNDDLFMFVTWKGCSSIDAVHINDIKEAYPLQIIKYFESLR
IIVP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5xyv-a1-m1-cB 64 64 1.0000 1.0000 1.0000 6.41e-44 5xyv-a1-m1-cA_5xyv-a1-m1-cB
2 5xyv-a1-m1-cA 63 63 0.9844 1.0000 1.0000 3.32e-43 5xyv-a1-m1-cA_5xyv-a1-m1-cB
3 5xyw-a1-m1-cA 54 55 0.5938 0.7037 0.6909 9.41e-25 5xyw-a1-m1-cB_5xyw-a1-m1-cA
4 5xyw-a1-m1-cB 42 47 0.4531 0.6905 0.6170 6.11e-14 5xyw-a1-m1-cB_5xyw-a1-m1-cA
5 3kup-a1-m1-cB 62 58 0.2500 0.2581 0.2759 7.10e-04 3kup-a1-m1-cA_3kup-a1-m1-cB
6 2fmm-a1-m2-cC 67 57 0.2344 0.2239 0.2632 7.99e-04 2fmm-a1-m2-cC_2fmm-a1-m2-cA, 2fmm-a1-m2-cD_2fmm-a1-m2-cC
7 2fmm-a1-m2-cA 68 57 0.2344 0.2206 0.2632 8.41e-04 2fmm-a1-m2-cC_2fmm-a1-m2-cA, 2fmm-a1-m2-cD_2fmm-a1-m2-cA
8 3p7j-a2-m2-cA 59 54 0.2500 0.2712 0.2963 0.002 3p7j-a2-m2-cA_3p7j-a2-m1-cB
9 3p7j-a1-m1-cA 59 54 0.2500 0.2712 0.2963 0.002 3p7j-a1-m1-cA_3p7j-a1-m1-cB
10 3p7j-a2-m1-cB 61 55 0.2500 0.2623 0.2909 0.003 3p7j-a2-m2-cA_3p7j-a2-m1-cB
11 3p7j-a1-m1-cB 61 55 0.2500 0.2623 0.2909 0.003 3p7j-a1-m1-cA_3p7j-a1-m1-cB
12 3kup-a1-m1-cA 59 57 0.2344 0.2542 0.2632 0.003 3kup-a1-m1-cA_3kup-a1-m1-cB
13 2fmm-a1-m2-cD 66 56 0.2188 0.2121 0.2500 0.004 2fmm-a1-m2-cD_2fmm-a1-m2-cA, 2fmm-a1-m2-cD_2fmm-a1-m2-cC
14 5de0-a2-m1-cD 296 39 0.2188 0.0473 0.3590 0.27 5de0-a2-m1-cD_5de0-a2-m1-cC
15 5de0-a2-m1-cC 297 39 0.2188 0.0471 0.3590 0.27 5de0-a2-m1-cD_5de0-a2-m1-cC
16 3oht-a1-m1-cB 331 37 0.1719 0.0332 0.2973 0.69 3oht-a1-m1-cA_3oht-a1-m1-cB
17 3oht-a1-m1-cA 331 37 0.1719 0.0332 0.2973 0.69 3oht-a1-m1-cA_3oht-a1-m1-cB
18 3gcu-a2-m1-cB 337 37 0.1719 0.0326 0.2973 0.95 3gcu-a2-m1-cB_3gcu-a2-m1-cA
19 3c5u-a1-m2-cA 338 37 0.1719 0.0325 0.2973 0.95 3c5u-a1-m1-cA_3c5u-a1-m2-cA
20 3c5u-a1-m1-cA 338 37 0.1719 0.0325 0.2973 0.95 3c5u-a1-m1-cA_3c5u-a1-m2-cA
21 3gcu-a2-m1-cA 339 37 0.1719 0.0324 0.2973 0.96 3gcu-a2-m1-cB_3gcu-a2-m1-cA
22 7etm-a1-m1-cL 497 35 0.2031 0.0262 0.3714 2.3 7etm-a1-m1-cK_7etm-a1-m1-cL, 7etm-a1-m1-cL_7etm-a1-m1-cG
23 7etm-a1-m1-cK 497 35 0.2031 0.0262 0.3714 2.3 7etm-a1-m1-cK_7etm-a1-m1-cL
24 7etm-a1-m1-cG 498 35 0.2031 0.0261 0.3714 2.3 7etm-a1-m1-cL_7etm-a1-m1-cG
25 3ldh-a1-m4-cA 329 41 0.1875 0.0365 0.2927 2.5 3ldh-a1-m4-cA_3ldh-a1-m1-cA, 3ldh-a1-m4-cA_3ldh-a1-m2-cA, 3ldh-a1-m4-cA_3ldh-a1-m3-cA
26 3ldh-a1-m3-cA 329 41 0.1875 0.0365 0.2927 2.5 3ldh-a1-m4-cA_3ldh-a1-m3-cA
27 3ldh-a1-m2-cA 329 41 0.1875 0.0365 0.2927 2.5 3ldh-a1-m4-cA_3ldh-a1-m2-cA
28 3ldh-a1-m1-cA 329 41 0.1875 0.0365 0.2927 2.5 3ldh-a1-m4-cA_3ldh-a1-m1-cA
29 2ogj-a1-m1-cC 310 17 0.1250 0.0258 0.4706 9.0 2ogj-a1-m1-cC_2ogj-a1-m1-cD, 2ogj-a1-m1-cC_2ogj-a1-m1-cE
30 2ogj-a1-m1-cF 351 17 0.1250 0.0228 0.4706 9.0 2ogj-a1-m1-cF_2ogj-a1-m1-cA, 2ogj-a1-m1-cF_2ogj-a1-m1-cE
31 2ogj-a1-m1-cD 356 17 0.1250 0.0225 0.4706 9.0 2ogj-a1-m1-cC_2ogj-a1-m1-cD
32 2ogj-a1-m1-cE 364 17 0.1250 0.0220 0.4706 9.1 2ogj-a1-m1-cC_2ogj-a1-m1-cE, 2ogj-a1-m1-cF_2ogj-a1-m1-cE
33 2ogj-a1-m1-cA 371 17 0.1250 0.0216 0.4706 9.1 2ogj-a1-m1-cF_2ogj-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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