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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
KPKRLCQVCGDHASGFHYGVWSCEGCKAFFKRSIQVDYVCPATNNCTIDKHRRKSCQACR
LRKCLEVGMT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4oln-a1-m1-cA 70 70 1.0000 1.0000 1.0000 1.11e-48 4oln-a1-m1-cB_4oln-a1-m1-cA
2 4oln-a1-m1-cB 67 68 0.9571 1.0000 0.9853 2.20e-44 4oln-a1-m1-cB_4oln-a1-m1-cA
3 1hcq-a2-m1-cF 71 69 0.8143 0.8028 0.8261 1.21e-38 1hcq-a2-m1-cF_1hcq-a2-m1-cE
4 1hcq-a2-m1-cE 74 71 0.8143 0.7703 0.8028 1.05e-36 1hcq-a2-m1-cF_1hcq-a2-m1-cE
5 8ifo-a1-m1-cB 80 70 0.7429 0.6500 0.7429 1.61e-32 8ifo-a1-m1-cA_8ifo-a1-m1-cB
6 8ifo-a1-m1-cA 76 69 0.7286 0.6711 0.7391 2.03e-31 8ifo-a1-m1-cA_8ifo-a1-m1-cB
7 1r4i-a1-m1-cA 74 71 0.5714 0.5405 0.5634 1.92e-24 1r4i-a1-m1-cB_1r4i-a1-m1-cA
8 2c7a-a1-m1-cB 76 71 0.5571 0.5132 0.5493 1.34e-23 2c7a-a1-m1-cB_2c7a-a1-m1-cA
9 2c7a-a1-m1-cA 78 71 0.5571 0.5000 0.5493 1.46e-23 2c7a-a1-m1-cB_2c7a-a1-m1-cA
10 6l6l-a1-m1-cB 84 68 0.5857 0.4881 0.6029 2.04e-23 6l6l-a1-m1-cB_6l6l-a1-m1-cA
11 6l6l-a1-m1-cA 85 68 0.5857 0.4824 0.6029 2.27e-23 6l6l-a1-m1-cB_6l6l-a1-m1-cA
12 1r4i-a1-m1-cB 71 69 0.5571 0.5493 0.5652 4.57e-23 1r4i-a1-m1-cB_1r4i-a1-m1-cA
13 7xv6-a1-m1-cB 77 66 0.5714 0.5195 0.6061 6.04e-23 7xv6-a1-m1-cB_7xv6-a1-m1-cA
14 7xv9-a1-m1-cB 80 66 0.5714 0.5000 0.6061 6.26e-23 7xv9-a1-m1-cA_7xv9-a1-m1-cB
15 7xv9-a1-m1-cA 80 66 0.5714 0.5000 0.6061 6.26e-23 7xv9-a1-m1-cA_7xv9-a1-m1-cB
16 7xv6-a1-m1-cA 84 66 0.5714 0.4762 0.6061 6.90e-23 7xv6-a1-m1-cB_7xv6-a1-m1-cA
17 6fbq-a1-m1-cB 81 70 0.5429 0.4691 0.5429 9.14e-23 6fbq-a1-m1-cA_6fbq-a1-m1-cB
18 6fbq-a1-m1-cA 80 70 0.5429 0.4750 0.5429 1.04e-22 6fbq-a1-m1-cA_6fbq-a1-m1-cB
19 4zlh-a1-m1-cB 338 29 0.1571 0.0325 0.3793 1.3 4zlh-a1-m1-cA_4zlh-a1-m1-cB
20 4zlh-a1-m1-cA 323 29 0.1571 0.0341 0.3793 1.5 4zlh-a1-m1-cA_4zlh-a1-m1-cB
21 7wzb-a1-m1-cB 254 29 0.1571 0.0433 0.3793 3.0 7wzb-a1-m1-cA_7wzb-a1-m1-cB
22 7wzb-a1-m1-cA 251 29 0.1571 0.0438 0.3793 3.1 7wzb-a1-m1-cA_7wzb-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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