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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
KPLLTKREREVFELLVQDKTTKEIASELFISEKTVRNHISNAMQKLGVKGRSQAVVELLR
MGELEL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1fse-a2-m1-cC 67 66 1.0000 0.9851 1.0000 5.26e-42 1fse-a2-m1-cF_1fse-a2-m1-cC
2 1fse-a3-m1-cD 66 66 1.0000 1.0000 1.0000 6.74e-42 1fse-a3-m1-cE_1fse-a3-m1-cD
3 1fse-a3-m1-cE 64 64 0.9697 1.0000 1.0000 6.37e-40 1fse-a3-m1-cE_1fse-a3-m1-cD
4 1fse-a2-m1-cF 50 65 0.7576 1.0000 0.7692 3.16e-26 1fse-a2-m1-cF_1fse-a2-m1-cC
5 7x1k-a1-m1-cB 68 64 0.4545 0.4412 0.4688 4.23e-15 7x1k-a1-m1-cB_7x1k-a1-m1-cA
6 7x1k-a1-m1-cA 69 64 0.4545 0.4348 0.4688 4.53e-15 7x1k-a1-m1-cB_7x1k-a1-m1-cA
7 4wuh-a1-m1-cB 68 59 0.4242 0.4118 0.4746 2.64e-14 4wuh-a1-m1-cA_4wuh-a1-m1-cB
8 4wuh-a1-m1-cA 68 59 0.4242 0.4118 0.4746 2.64e-14 4wuh-a1-m1-cA_4wuh-a1-m1-cB
9 5hev-a2-m1-cB 209 59 0.4091 0.1292 0.4576 1.02e-11 5hev-a2-m1-cB_5hev-a2-m1-cC
10 5hev-a2-m1-cC 210 59 0.4091 0.1286 0.4576 1.07e-11 5hev-a2-m1-cB_5hev-a2-m1-cC
11 4ldz-a1-m1-cA 196 52 0.4394 0.1480 0.5577 7.81e-11 4ldz-a1-m1-cB_4ldz-a1-m1-cA
12 4ldz-a1-m1-cB 188 48 0.4242 0.1489 0.5833 4.71e-10 4ldz-a1-m1-cB_4ldz-a1-m1-cA
13 3c3w-a1-m1-cB 210 53 0.3636 0.1143 0.4528 1.53e-09 3c3w-a1-m1-cB_3c3w-a1-m1-cA
14 3c3w-a1-m1-cA 211 53 0.3636 0.1137 0.4528 1.57e-09 3c3w-a1-m1-cB_3c3w-a1-m1-cA
15 3klo-a1-m1-cA 217 53 0.3485 0.1060 0.4340 2.11e-09 3klo-a1-m2-cB_3klo-a1-m1-cA
16 3klo-a1-m2-cB 216 53 0.3485 0.1065 0.4340 2.11e-09 3klo-a1-m2-cB_3klo-a1-m1-cA
17 3c57-a1-m1-cA 51 50 0.3333 0.4314 0.4400 4.21e-09 3c57-a1-m1-cB_3c57-a1-m1-cA
18 4if4-a3-m1-cC 208 54 0.3636 0.1154 0.4444 8.19e-09 4if4-a3-m1-cB_4if4-a3-m1-cC
19 4if4-a3-m1-cB 208 54 0.3636 0.1154 0.4444 8.19e-09 4if4-a3-m1-cB_4if4-a3-m1-cC
20 4if4-a1-m1-cD 208 54 0.3636 0.1154 0.4444 8.19e-09 4if4-a1-m1-cB_4if4-a1-m1-cD
21 4if4-a1-m1-cB 208 54 0.3636 0.1154 0.4444 8.19e-09 4if4-a1-m1-cA_4if4-a1-m1-cB, 4if4-a1-m1-cB_4if4-a1-m1-cD
22 4if4-a1-m1-cA 208 54 0.3636 0.1154 0.4444 8.19e-09 4if4-a1-m1-cA_4if4-a1-m1-cB
23 3c57-a1-m1-cB 49 49 0.3182 0.4286 0.4286 1.77e-08 3c57-a1-m1-cB_3c57-a1-m1-cA
24 1zlj-a4-m1-cG 67 53 0.3636 0.3582 0.4528 1.32e-06 1zlj-a4-m1-cH_1zlj-a4-m1-cG
25 1zlj-a4-m1-cH 64 57 0.3939 0.4062 0.4561 1.32e-06 1zlj-a4-m1-cH_1zlj-a4-m1-cG
26 7r3g-a1-m1-cB 236 59 0.3485 0.0975 0.3898 1.57e-06 7r3g-a1-m1-cA_7r3g-a1-m1-cB
27 7r3g-a1-m1-cA 236 59 0.3485 0.0975 0.3898 1.57e-06 7r3g-a1-m1-cA_7r3g-a1-m1-cB
28 3clo-a2-m2-cC 248 64 0.3788 0.1008 0.3906 5.77e-06 3clo-a2-m1-cC_3clo-a2-m2-cC
29 3clo-a2-m1-cC 248 64 0.3788 0.1008 0.3906 5.77e-06 3clo-a2-m1-cC_3clo-a2-m2-cC
30 7vim-a1-m1-cA 64 63 0.3636 0.3750 0.3810 8.23e-06 7vim-a1-m1-cA_7vim-a1-m2-cB
31 7vim-a1-m2-cB 67 63 0.3636 0.3582 0.3810 8.66e-06 7vim-a1-m1-cA_7vim-a1-m2-cB
32 6cc0-a1-m1-cB 233 61 0.3485 0.0987 0.3770 1.63e-05 6cc0-a1-m1-cB_6cc0-a1-m1-cA
33 6cc0-a1-m1-cA 234 61 0.3485 0.0983 0.3770 1.82e-05 6cc0-a1-m1-cB_6cc0-a1-m1-cA
34 4zms-a1-m1-cA 207 51 0.2576 0.0821 0.3333 2.40e-05 4zms-a1-m1-cB_4zms-a1-m1-cA
35 4zms-a1-m1-cB 200 51 0.2576 0.0850 0.3333 2.70e-05 4zms-a1-m1-cB_4zms-a1-m1-cA
36 4y15-a2-m2-cB 237 50 0.2879 0.0802 0.3800 1.73e-04 4y15-a2-m1-cB_4y15-a2-m2-cB
37 4y15-a2-m1-cB 237 50 0.2879 0.0802 0.3800 1.73e-04 4y15-a2-m1-cB_4y15-a2-m2-cB
38 1rnl-a3-m2-cA 200 53 0.3182 0.1050 0.3962 0.002 1rnl-a3-m1-cA_1rnl-a3-m2-cA
39 1rnl-a3-m1-cA 200 53 0.3182 0.1050 0.3962 0.002 1rnl-a3-m1-cA_1rnl-a3-m2-cA
40 1rnl-a2-m4-cA 200 53 0.3182 0.1050 0.3962 0.002 1rnl-a2-m2-cA_1rnl-a2-m4-cA
41 1rnl-a2-m2-cA 200 53 0.3182 0.1050 0.3962 0.002 1rnl-a2-m2-cA_1rnl-a2-m4-cA
42 8b4a-a1-m1-cD 239 49 0.2727 0.0753 0.3673 0.004 8b4a-a1-m1-cD_8b4a-a1-m1-cC
43 8b4a-a1-m1-cC 241 49 0.2727 0.0747 0.3673 0.004 8b4a-a1-m1-cD_8b4a-a1-m1-cC
44 6ide-a1-m1-cA 226 52 0.2879 0.0841 0.3654 0.017 6ide-a1-m1-cA_6ide-a1-m1-cB
45 6ide-a1-m1-cB 228 52 0.2879 0.0833 0.3654 0.017 6ide-a1-m1-cA_6ide-a1-m1-cB
46 6kju-a1-m1-cB 227 52 0.2879 0.0837 0.3654 0.020 6kju-a1-m1-cA_6kju-a1-m1-cB
47 6kju-a1-m1-cA 221 52 0.2879 0.0860 0.3654 0.021 6kju-a1-m1-cA_6kju-a1-m1-cB
48 6zj2-a3-m1-cL 166 45 0.2727 0.1084 0.4000 0.14 6zj2-a3-m1-cL_6zj2-a3-m1-cM
49 6zj2-a3-m1-cM 179 45 0.2727 0.1006 0.4000 0.16 6zj2-a3-m1-cL_6zj2-a3-m1-cM
50 7dwm-a1-m1-cB 218 52 0.2424 0.0734 0.3077 0.43 7dwm-a1-m1-cA_7dwm-a1-m1-cB
51 7dwm-a1-m1-cA 218 52 0.2424 0.0734 0.3077 0.51 7dwm-a1-m1-cA_7dwm-a1-m1-cB
52 4p8r-a1-m1-cC 330 38 0.1818 0.0364 0.3158 0.92 4p8r-a1-m1-cC_4p8r-a1-m1-cD
53 4p8r-a1-m1-cD 331 38 0.1818 0.0363 0.3158 0.92 4p8r-a1-m1-cA_4p8r-a1-m1-cD, 4p8r-a1-m1-cB_4p8r-a1-m1-cD, 4p8r-a1-m1-cC_4p8r-a1-m1-cD
54 4p8r-a1-m1-cB 331 38 0.1818 0.0363 0.3158 0.92 4p8r-a1-m1-cB_4p8r-a1-m1-cD
55 4p8r-a1-m1-cA 331 38 0.1818 0.0363 0.3158 0.92 4p8r-a1-m1-cA_4p8r-a1-m1-cD
56 7v9r-a1-m1-cC 516 34 0.2424 0.0310 0.4706 4.1 7v9r-a1-m1-cC_7v9r-a1-m1-cB
57 7v98-a1-m1-cA 386 34 0.2424 0.0415 0.4706 4.1 7v98-a1-m1-cA_7v98-a1-m1-cB
58 7v98-a1-m1-cB 386 34 0.2424 0.0415 0.4706 4.1 7v98-a1-m1-cA_7v98-a1-m1-cB
59 7v9r-a1-m1-cB 520 34 0.2424 0.0308 0.4706 4.2 7v9r-a1-m1-cC_7v9r-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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