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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
KPTITKQELYSLVAADTQLNKALIERIFTSQQKIIQNALKHNQEVIIPPGIKFTVVTVKA
KPARQGHNPATGEPIQIKAKPEHKAVKIRALKPVHDMLN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6lmj-a1-m1-cA 99 99 1.0000 1.0000 1.0000 1.34e-67 6lmj-a1-m1-cB_6lmj-a1-m1-cA
2 6lmj-a1-m1-cB 98 98 0.9899 1.0000 1.0000 7.03e-67 6lmj-a1-m1-cB_6lmj-a1-m1-cA
3 5lvt-a2-m1-cD 91 84 0.2929 0.3187 0.3452 7.44e-06 5lvt-a2-m1-cB_5lvt-a2-m1-cD
4 5lvt-a2-m1-cB 91 84 0.2929 0.3187 0.3452 7.44e-06 5lvt-a2-m1-cB_5lvt-a2-m1-cD
5 5l8z-a1-m2-cA 95 65 0.2626 0.2737 0.4000 1.06e-04 5l8z-a1-m1-cA_5l8z-a1-m2-cA
6 5l8z-a1-m1-cA 95 65 0.2626 0.2737 0.4000 1.06e-04 5l8z-a1-m1-cA_5l8z-a1-m2-cA
7 4qjn-a2-m1-cD 90 99 0.3030 0.3333 0.3030 1.72e-04 4qjn-a2-m1-cB_4qjn-a2-m1-cD
8 4qjn-a2-m1-cB 90 99 0.3030 0.3333 0.3030 1.72e-04 4qjn-a2-m1-cB_4qjn-a2-m1-cD
9 1hue-a1-m1-cB 90 94 0.3030 0.3333 0.3191 6.51e-04 1hue-a1-m1-cA_1hue-a1-m1-cB
10 1hue-a1-m1-cA 90 94 0.3030 0.3333 0.3191 6.51e-04 1hue-a1-m1-cA_1hue-a1-m1-cB
11 1exe-a1-m1-cB 99 74 0.2222 0.2222 0.2973 0.004 1exe-a1-m1-cA_1exe-a1-m1-cB
12 1exe-a1-m1-cA 99 74 0.2222 0.2222 0.2973 0.004 1exe-a1-m1-cA_1exe-a1-m1-cB
13 3rhi-a2-m1-cC 90 86 0.2727 0.3000 0.3140 0.005 3rhi-a2-m1-cD_3rhi-a2-m1-cC
14 1wtu-a1-m1-cB 99 74 0.2121 0.2121 0.2838 0.008 1wtu-a1-m1-cA_1wtu-a1-m1-cB
15 1wtu-a1-m1-cA 99 74 0.2121 0.2121 0.2838 0.008 1wtu-a1-m1-cA_1wtu-a1-m1-cB
16 6s1k-a1-m1-cB 383 40 0.1616 0.0418 0.4000 0.015 6s1k-a1-m1-cA_6s1k-a1-m1-cB
17 6s1k-a1-m1-cA 383 40 0.1616 0.0418 0.4000 0.015 6s1k-a1-m1-cA_6s1k-a1-m1-cB
18 1p71-a1-m1-cB 93 76 0.2020 0.2151 0.2632 0.024 1p71-a1-m1-cB_1p71-a1-m1-cA
19 1p71-a1-m1-cA 94 76 0.2020 0.2128 0.2632 0.026 1p71-a1-m1-cB_1p71-a1-m1-cA
20 6o8q-a1-m1-cH 91 89 0.2525 0.2747 0.2809 0.074 6o8q-a1-m1-cG_6o8q-a1-m1-cH
21 6o8q-a1-m1-cG 91 89 0.2525 0.2747 0.2809 0.074 6o8q-a1-m1-cG_6o8q-a1-m1-cH
22 5yh1-a1-m3-cA 429 52 0.1515 0.0350 0.2885 0.30 5yh1-a1-m2-cA_5yh1-a1-m3-cA
23 5yh1-a1-m2-cA 429 52 0.1515 0.0350 0.2885 0.30 5yh1-a1-m2-cA_5yh1-a1-m3-cA
24 6n2l-a1-m2-cA 88 96 0.2828 0.3182 0.2917 1.3 6n2l-a1-m1-cA_6n2l-a1-m2-cA
25 6n2l-a1-m1-cA 88 96 0.2828 0.3182 0.2917 1.3 6n2l-a1-m1-cA_6n2l-a1-m2-cA
26 1iip-a3-m4-cA 297 25 0.0909 0.0303 0.3600 9.5 1iip-a3-m1-cA_1iip-a3-m4-cA
27 1iip-a3-m1-cA 297 25 0.0909 0.0303 0.3600 9.5 1iip-a3-m1-cA_1iip-a3-m4-cA
28 1iip-a2-m4-cA 297 25 0.0909 0.0303 0.3600 9.5 1iip-a2-m2-cA_1iip-a2-m4-cA, 1iip-a2-m3-cA_1iip-a2-m4-cA
29 1iip-a2-m3-cA 297 25 0.0909 0.0303 0.3600 9.5 1iip-a2-m3-cA_1iip-a2-m4-cA
30 1iip-a2-m2-cA 297 25 0.0909 0.0303 0.3600 9.5 1iip-a2-m2-cA_1iip-a2-m4-cA

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Reference:
Jacob Schwartz et al.

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