Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=98)
KPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSALINNNRKLTTEMAFRLAKVFDTT
VDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYLAR

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 2eby-a1-m1-cB 98 98 1.0000 1.0000 1.0000 3.26e-68 2eby-a1-m1-cB_2eby-a1-m1-cA
2 2eby-a1-m1-cA 102 98 1.0000 0.9608 1.0000 4.71e-68 2eby-a1-m1-cB_2eby-a1-m1-cA
3 3trb-a2-m1-cA 89 85 0.3673 0.4045 0.4235 7.34e-16 3trb-a2-m1-cA_3trb-a2-m1-cB
4 3trb-a2-m1-cB 90 85 0.3673 0.4000 0.4235 9.67e-16 3trb-a2-m1-cA_3trb-a2-m1-cB
5 3trb-a1-m2-cB 90 85 0.3673 0.4000 0.4235 9.67e-16 3trb-a1-m1-cB_3trb-a1-m2-cB
6 3trb-a1-m1-cB 90 85 0.3673 0.4000 0.4235 9.67e-16 3trb-a1-m1-cB_3trb-a1-m2-cB
7 6lb3-a3-m1-cC 93 73 0.2755 0.2903 0.3699 2.93e-13 6lb3-a3-m1-cD_6lb3-a3-m1-cC
8 6lb3-a3-m1-cD 92 73 0.2755 0.2935 0.3699 2.99e-13 6lb3-a3-m1-cD_6lb3-a3-m1-cC
9 6f8h-a2-m3-cC 93 79 0.2857 0.3011 0.3544 9.95e-12 6f8h-a2-m3-cC_6f8h-a2-m1-cB
10 6f8h-a2-m1-cB 94 79 0.2857 0.2979 0.3544 1.15e-11 6f8h-a2-m3-cC_6f8h-a2-m1-cB
11 4mcx-a1-m1-cA 93 82 0.2551 0.2688 0.3049 2.38e-07 4mcx-a1-m1-cC_4mcx-a1-m1-cA
12 4mcx-a1-m1-cC 92 83 0.2551 0.2717 0.3012 2.68e-07 4mcx-a1-m1-cC_4mcx-a1-m1-cA
13 2ict-a2-m2-cA 89 76 0.2653 0.2921 0.3421 0.008 2ict-a2-m1-cA_2ict-a2-m2-cA
14 2ict-a2-m1-cA 89 76 0.2653 0.2921 0.3421 0.008 2ict-a2-m1-cA_2ict-a2-m2-cA
15 6irp-a1-m1-cB 133 63 0.1939 0.1429 0.3016 0.023 6irp-a1-m1-cA_6irp-a1-m1-cB
16 6irp-a1-m1-cA 133 63 0.1939 0.1429 0.3016 0.023 6irp-a1-m1-cA_6irp-a1-m1-cB
17 3op9-a1-m4-cA 106 84 0.2449 0.2264 0.2857 0.097 3op9-a1-m1-cA_3op9-a1-m4-cA, 3op9-a1-m2-cA_3op9-a1-m4-cA, 3op9-a1-m3-cA_3op9-a1-m4-cA
18 3op9-a1-m3-cA 106 84 0.2449 0.2264 0.2857 0.097 3op9-a1-m3-cA_3op9-a1-m4-cA
19 3op9-a1-m2-cA 106 84 0.2449 0.2264 0.2857 0.097 3op9-a1-m2-cA_3op9-a1-m4-cA
20 3op9-a1-m1-cA 106 84 0.2449 0.2264 0.2857 0.097 3op9-a1-m1-cA_3op9-a1-m4-cA
21 2p4w-a1-m1-cA 197 31 0.1224 0.0609 0.3871 1.5 2p4w-a1-m1-cA_2p4w-a1-m1-cB
22 2p4w-a1-m1-cB 198 31 0.1224 0.0606 0.3871 1.5 2p4w-a1-m1-cA_2p4w-a1-m1-cB
23 2nlz-a1-m1-cC 535 46 0.1735 0.0318 0.3696 1.8 2nlz-a1-m1-cC_2nlz-a1-m1-cD
24 2nlz-a1-m1-cB 535 46 0.1735 0.0318 0.3696 1.8 2nlz-a1-m1-cB_2nlz-a1-m1-cD
25 2nlz-a1-m1-cD 537 46 0.1735 0.0317 0.3696 1.8 2nlz-a1-m1-cB_2nlz-a1-m1-cD, 2nlz-a1-m1-cC_2nlz-a1-m1-cD
26 3pay-a1-m1-cC 300 31 0.1327 0.0433 0.4194 6.3 3pay-a1-m1-cC_3pay-a1-m1-cD
27 2v78-a1-m2-cC 311 61 0.1939 0.0611 0.3115 6.6 2v78-a1-m1-cB_2v78-a1-m2-cC, 2v78-a1-m1-cC_2v78-a1-m2-cC, 2v78-a1-m2-cB_2v78-a1-m2-cC
28 2v78-a1-m2-cB 311 61 0.1939 0.0611 0.3115 6.6 2v78-a1-m2-cB_2v78-a1-m2-cC
29 2v78-a1-m1-cC 311 61 0.1939 0.0611 0.3115 6.6 2v78-a1-m1-cC_2v78-a1-m2-cC
30 2v78-a1-m1-cB 311 61 0.1939 0.0611 0.3115 6.6 2v78-a1-m1-cB_2v78-a1-m2-cC
31 3pay-a1-m1-cD 306 31 0.1327 0.0425 0.4194 6.7 3pay-a1-m1-cB_3pay-a1-m1-cD, 3pay-a1-m1-cC_3pay-a1-m1-cD
32 3pay-a1-m1-cB 302 31 0.1327 0.0430 0.4194 7.0 3pay-a1-m1-cB_3pay-a1-m1-cD
33 3u7x-a3-m2-cA 187 63 0.1837 0.0963 0.2857 7.1 3u7x-a3-m1-cB_3u7x-a3-m2-cA
34 3u7x-a3-m1-cB 187 63 0.1837 0.0963 0.2857 7.1 3u7x-a3-m1-cB_3u7x-a3-m2-cA
35 2w97-a1-m1-cA 187 63 0.1837 0.0963 0.2857 7.1 2w97-a1-m1-cB_2w97-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600