HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=67)
KPVHLWTKPDVADWLESLNWGEHKEAFMDNEIDGSHLPNLQKEDLIDLGVTRVGHRMNIE
RALKQLL

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	8b10-a1-m1-cC	69	67	1.0000	0.9710	1.0000	5.36e-45	8b10-a1-m1-cA_8b10-a1-m1-cC
2	8b10-a1-m1-cA	69	67	1.0000	0.9710	1.0000	5.36e-45	8b10-a1-m1-cA_8b10-a1-m1-cC, 8b10-a1-m1-cF_8b10-a1-m1-cA
3	8b10-a1-m1-cF	67	67	1.0000	1.0000	1.0000	5.85e-45	8b10-a1-m1-cF_8b10-a1-m1-cA
4	3bq7-a1-m3-cA	68	66	0.4776	0.4706	0.4848	6.83e-16	3bq7-a1-m3-cB_3bq7-a1-m3-cA
5	3bq7-a1-m3-cB	67	65	0.4776	0.4776	0.4923	1.36e-15	3bq7-a1-m3-cB_3bq7-a1-m3-cA
6	6brg-a5-m1-cD	500	63	0.3582	0.0480	0.3810	7.84e-06	6brg-a5-m1-cC_6brg-a5-m1-cD
7	6brg-a5-m1-cC	500	63	0.3582	0.0480	0.3810	7.84e-06	6brg-a5-m1-cC_6brg-a5-m1-cD
8	1b4f-a2-m1-cE	74	55	0.2388	0.2162	0.2909	4.40e-04	1b4f-a2-m1-cE_1b4f-a2-m1-cF, 1b4f-a2-m1-cE_1b4f-a2-m2-cH
9	1b4f-a2-m2-cH	76	55	0.2388	0.2105	0.2909	4.93e-04	1b4f-a2-m1-cE_1b4f-a2-m2-cH
10	1b4f-a2-m1-cF	77	55	0.2388	0.2078	0.2909	5.30e-04	1b4f-a2-m1-cE_1b4f-a2-m1-cF
11	1x9x-a1-m1-cB	62	59	0.2687	0.2903	0.3051	0.004	1x9x-a1-m1-cA_1x9x-a1-m1-cB
12	1x9x-a1-m1-cA	62	59	0.2687	0.2903	0.3051	0.004	1x9x-a1-m1-cA_1x9x-a1-m1-cB
13	5l1m-a1-m2-cA	140	56	0.2388	0.1143	0.2857	0.004	5l1m-a1-m1-cA_5l1m-a1-m2-cA
14	5l1m-a1-m2-cA	140	62	0.2239	0.1071	0.2419	0.73	5l1m-a1-m1-cA_5l1m-a1-m2-cA
15	5l1m-a1-m1-cA	140	56	0.2388	0.1143	0.2857	0.004	5l1m-a1-m1-cA_5l1m-a1-m2-cA
16	5l1m-a1-m1-cA	140	62	0.2239	0.1071	0.2419	0.73	5l1m-a1-m1-cA_5l1m-a1-m2-cA
17	1i8d-a1-m1-cC	185	66	0.3582	0.1297	0.3636	1.1	1i8d-a1-m1-cC_1i8d-a1-m1-cA, 1i8d-a1-m1-cC_1i8d-a1-m1-cB
18	2wqk-a1-m2-cB	248	31	0.1791	0.0484	0.3871	1.2	2wqk-a1-m1-cB_2wqk-a1-m2-cB, 2wqk-a1-m2-cA_2wqk-a1-m2-cB
19	2wqk-a1-m2-cA	248	31	0.1791	0.0484	0.3871	1.2	2wqk-a1-m2-cA_2wqk-a1-m2-cB
20	2wqk-a1-m1-cB	248	31	0.1791	0.0484	0.3871	1.2	2wqk-a1-m1-cB_2wqk-a1-m2-cB
21	1i8d-a1-m1-cA	206	66	0.3582	0.1165	0.3636	1.2	1i8d-a1-m1-cC_1i8d-a1-m1-cA
22	1i8d-a1-m1-cB	201	66	0.3582	0.1194	0.3636	1.2	1i8d-a1-m1-cC_1i8d-a1-m1-cB
23	3ky8-a1-m1-cA	178	48	0.2388	0.0899	0.3333	2.6	3ky8-a1-m1-cB_3ky8-a1-m1-cA
24	3ky8-a1-m1-cB	171	48	0.2388	0.0936	0.3333	2.6	3ky8-a1-m1-cB_3ky8-a1-m1-cA
25	2qb0-a2-m1-cB	241	50	0.2537	0.0705	0.3400	5.2	2qb0-a2-m1-cC_2qb0-a2-m1-cB
26	4boc-a1-m2-cA	989	18	0.1493	0.0101	0.5556	5.8	4boc-a1-m1-cA_4boc-a1-m2-cA
27	4boc-a1-m1-cA	989	18	0.1493	0.0101	0.5556	5.8	4boc-a1-m1-cA_4boc-a1-m2-cA
28	7pzp-a1-m1-cB	988	18	0.1493	0.0101	0.5556	6.0	7pzp-a1-m1-cB_7pzp-a1-m1-cA
29	7pzp-a1-m1-cA	990	18	0.1493	0.0101	0.5556	6.0	7pzp-a1-m1-cB_7pzp-a1-m1-cA
30	3ty2-a1-m1-cB	245	31	0.1642	0.0449	0.3548	7.5	3ty2-a1-m1-cA_3ty2-a1-m1-cB
31	3ty2-a1-m1-cA	245	31	0.1642	0.0449	0.3548	7.5	3ty2-a1-m1-cA_3ty2-a1-m1-cB
32	2vvt-a1-m1-cA	269	33	0.2239	0.0558	0.4545	8.2	2vvt-a1-m1-cB_2vvt-a1-m1-cA

[Back]

Reference:
Jacob Schwartz et al.