Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=91)
KPVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEF
DVVEGEKGAEATNVTGPGGVPVKGSRYAPNR

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 7f3i-a1-m1-cA 93 91 1.0000 0.9785 1.0000 2.76e-62 7f3i-a1-m1-cE_7f3i-a1-m1-cA
2 7f3i-a1-m1-cE 91 91 1.0000 1.0000 1.0000 3.13e-62 7f3i-a1-m1-cE_7f3i-a1-m1-cA
3 3i2z-a1-m1-cA 71 70 0.3407 0.4366 0.4429 5.68e-15 3i2z-a1-m1-cB_3i2z-a1-m1-cA
4 3i2z-a1-m1-cB 67 69 0.3407 0.4627 0.4493 1.07e-14 3i2z-a1-m1-cB_3i2z-a1-m1-cA
5 3ulj-a3-m2-cA 87 82 0.3846 0.4023 0.4268 4.43e-14 3ulj-a3-m2-cA_3ulj-a3-m2-cB
6 3ulj-a3-m1-cA 87 82 0.3846 0.4023 0.4268 4.43e-14 3ulj-a3-m1-cA_3ulj-a3-m2-cB
7 4alp-a1-m4-cD 84 82 0.3846 0.4167 0.4268 5.53e-14 4alp-a1-m4-cD_4alp-a1-m2-cB
8 4alp-a1-m2-cB 86 82 0.3846 0.4070 0.4268 5.87e-14 4alp-a1-m4-cD_4alp-a1-m2-cB
9 3ulj-a3-m2-cB 89 82 0.3846 0.3933 0.4268 1.51e-12 3ulj-a3-m1-cA_3ulj-a3-m2-cB, 3ulj-a3-m2-cA_3ulj-a3-m2-cB
10 2i5m-a2-m2-cX 66 66 0.3077 0.4242 0.4242 4.88e-11 2i5m-a2-m1-cX_2i5m-a2-m2-cX
11 2i5m-a2-m1-cX 66 66 0.3077 0.4242 0.4242 4.88e-11 2i5m-a2-m1-cX_2i5m-a2-m2-cX
12 3cam-a1-m1-cB 65 65 0.2857 0.4000 0.4000 6.69e-11 3cam-a1-m1-cA_3cam-a1-m1-cB
13 3cam-a1-m1-cA 65 65 0.2857 0.4000 0.4000 6.69e-11 3cam-a1-m1-cA_3cam-a1-m1-cB
14 2hax-a1-m1-cB 66 66 0.3077 0.4242 0.4242 4.85e-10 2hax-a1-m1-cA_2hax-a1-m1-cB
15 2hax-a1-m1-cA 66 66 0.3077 0.4242 0.4242 4.85e-10 2hax-a1-m1-cA_2hax-a1-m1-cB
16 1c9o-a1-m1-cB 66 66 0.3077 0.4242 0.4242 4.85e-10 1c9o-a1-m1-cA_1c9o-a1-m1-cB
17 1c9o-a1-m1-cA 66 66 0.3077 0.4242 0.4242 4.85e-10 1c9o-a1-m1-cA_1c9o-a1-m1-cB
18 1hzb-a1-m1-cB 66 66 0.3077 0.4242 0.4242 6.10e-10 1hzb-a1-m1-cA_1hzb-a1-m1-cB
19 1hzb-a1-m1-cA 66 66 0.3077 0.4242 0.4242 6.10e-10 1hzb-a1-m1-cA_1hzb-a1-m1-cB
20 5jx4-a1-m1-cB 66 66 0.3077 0.4242 0.4242 6.72e-10 5jx4-a1-m1-cA_5jx4-a1-m1-cB
21 5jx4-a1-m1-cA 65 66 0.3077 0.4308 0.4242 7.17e-10 5jx4-a1-m1-cA_5jx4-a1-m1-cB
22 2bh8-a1-m2-cB 86 46 0.2308 0.2442 0.4565 5.53e-07 2bh8-a1-m1-cA_2bh8-a1-m2-cB, 2bh8-a1-m1-cB_2bh8-a1-m2-cB, 2bh8-a1-m2-cA_2bh8-a1-m2-cB
23 2bh8-a1-m1-cB 86 46 0.2308 0.2442 0.4565 5.53e-07 2bh8-a1-m1-cB_2bh8-a1-m2-cB
24 2bh8-a1-m2-cA 85 46 0.2308 0.2471 0.4565 5.72e-07 2bh8-a1-m2-cA_2bh8-a1-m2-cB
25 2bh8-a1-m1-cA 85 46 0.2308 0.2471 0.4565 5.72e-07 2bh8-a1-m1-cA_2bh8-a1-m2-cB
26 3aqq-a1-m1-cD 98 32 0.1209 0.1122 0.3438 0.72 3aqq-a1-m1-cC_3aqq-a1-m1-cD, 3aqq-a1-m1-cD_3aqq-a1-m1-cB
27 3aqq-a1-m1-cB 99 32 0.1209 0.1111 0.3438 0.74 3aqq-a1-m1-cC_3aqq-a1-m1-cB, 3aqq-a1-m1-cD_3aqq-a1-m1-cB
28 3q4n-a1-m1-cB 175 54 0.1758 0.0914 0.2963 0.75 3q4n-a1-m1-cA_3q4n-a1-m1-cB
29 3q4o-a1-m2-cA 169 54 0.1758 0.0947 0.2963 0.78 3q4o-a1-m1-cA_3q4o-a1-m2-cA
30 3q4o-a1-m1-cA 169 54 0.1758 0.0947 0.2963 0.78 3q4o-a1-m1-cA_3q4o-a1-m2-cA
31 3q4n-a1-m1-cA 169 54 0.1758 0.0947 0.2963 0.78 3q4n-a1-m1-cA_3q4n-a1-m1-cB
32 3aqq-a1-m1-cC 97 32 0.1209 0.1134 0.3438 1.0 3aqq-a1-m1-cC_3aqq-a1-m1-cB, 3aqq-a1-m1-cC_3aqq-a1-m1-cD
33 5yo9-a1-m1-cA 371 37 0.1538 0.0377 0.3784 5.5 5yo9-a1-m1-cB_5yo9-a1-m1-cA
34 5yo9-a1-m1-cB 366 37 0.1538 0.0383 0.3784 5.7 5yo9-a1-m1-cB_5yo9-a1-m1-cA
35 1oxw-a1-m1-cB 348 23 0.1209 0.0316 0.4783 8.9 1oxw-a1-m1-cB_1oxw-a1-m1-cC
36 1oxw-a1-m1-cC 350 23 0.1209 0.0314 0.4783 9.1 1oxw-a1-m1-cB_1oxw-a1-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600