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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=25)
KPYLCQQCGAAFAHNYDLKNHMRVH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8h9h-a1-m1-cF 25 25 1.0000 1.0000 1.0000 1.03e-13 8h9h-a1-m1-cF_8h9h-a1-m1-cG
2 8h9h-a1-m1-cG 81 25 1.0000 0.3086 1.0000 1.73e-13 8h9h-a1-m1-cF_8h9h-a1-m1-cG
3 5v3g-a1-m1-cG 26 25 0.4400 0.4231 0.4400 0.002 5v3g-a1-m1-cG_5v3g-a1-m1-cD
4 5v3g-a1-m1-cD 170 25 0.4400 0.0647 0.4400 0.090 5v3g-a1-m1-cG_5v3g-a1-m1-cD
5 5v3g-a1-m1-cD 170 25 0.4400 0.0647 0.4400 0.11 5v3g-a1-m1-cG_5v3g-a1-m1-cD
6 5v3g-a1-m1-cD 170 25 0.4400 0.0647 0.4400 0.11 5v3g-a1-m1-cG_5v3g-a1-m1-cD
7 5v3g-a1-m1-cD 170 25 0.4400 0.0647 0.4400 0.18 5v3g-a1-m1-cG_5v3g-a1-m1-cD
8 5v3g-a1-m1-cD 170 25 0.4400 0.0647 0.4400 0.21 5v3g-a1-m1-cG_5v3g-a1-m1-cD
9 5v3g-a1-m1-cD 170 25 0.4400 0.0647 0.4400 0.33 5v3g-a1-m1-cG_5v3g-a1-m1-cD
10 1f2i-a2-m1-cJ 66 27 0.3600 0.1364 0.3333 0.97 1f2i-a2-m1-cI_1f2i-a2-m1-cJ
11 1f2i-a2-m1-cJ 66 25 0.3600 0.1364 0.3600 1.4 1f2i-a2-m1-cI_1f2i-a2-m1-cJ
12 1f2i-a2-m1-cI 66 27 0.3600 0.1364 0.3333 0.97 1f2i-a2-m1-cI_1f2i-a2-m1-cJ
13 1f2i-a2-m1-cI 66 25 0.3600 0.1364 0.3600 1.4 1f2i-a2-m1-cI_1f2i-a2-m1-cJ
14 4m9v-a3-m1-cF 60 25 0.3200 0.1333 0.3200 1.2 4m9v-a3-m1-cC_4m9v-a3-m1-cF
15 4m9v-a3-m1-cF 60 25 0.3200 0.1333 0.3200 3.5 4m9v-a3-m1-cC_4m9v-a3-m1-cF
16 4m9v-a3-m1-cC 60 25 0.3200 0.1333 0.3200 1.2 4m9v-a3-m1-cC_4m9v-a3-m1-cF
17 4m9v-a3-m1-cC 60 25 0.3200 0.1333 0.3200 3.5 4m9v-a3-m1-cC_4m9v-a3-m1-cF
18 1llm-a1-m1-cC 87 25 0.3600 0.1034 0.3600 3.7 1llm-a1-m1-cD_1llm-a1-m1-cC
19 1llm-a1-m1-cC 87 21 0.3600 0.1034 0.4286 5.9 1llm-a1-m1-cD_1llm-a1-m1-cC
20 1llm-a1-m1-cD 85 25 0.3600 0.1059 0.3600 4.3 1llm-a1-m1-cD_1llm-a1-m1-cC
21 1llm-a1-m1-cD 85 25 0.3600 0.1059 0.3600 6.7 1llm-a1-m1-cD_1llm-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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