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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
KQAQVDYLALPGDAKLDTRSVDYKCENGRKFTVQYLNKGDNSLAVVPVSDNSTLVFSNVI
SASGAKYAAGQYIWWTKGEEATLYGDGVACKER

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3f6z-a1-m1-cD 93 93 1.0000 1.0000 1.0000 1.92e-65 3f6z-a1-m1-cB_3f6z-a1-m1-cD
2 3f6z-a1-m1-cB 93 93 1.0000 1.0000 1.0000 1.92e-65 3f6z-a1-m1-cB_3f6z-a1-m1-cD
3 4mis-a1-m1-cB 97 77 0.4301 0.4124 0.5195 9.35e-19 4mis-a1-m1-cB_4mis-a1-m1-cA
4 4mis-a1-m1-cA 98 77 0.4301 0.4082 0.5195 1.01e-18 4mis-a1-m1-cB_4mis-a1-m1-cA
5 4upi-a1-m2-cA 547 35 0.1290 0.0219 0.3429 2.4 4upi-a1-m1-cA_4upi-a1-m2-cA
6 4upi-a1-m1-cA 547 35 0.1290 0.0219 0.3429 2.4 4upi-a1-m1-cA_4upi-a1-m2-cA
7 5h4s-a1-m2-cA 284 29 0.1183 0.0387 0.3793 4.0 5h4s-a1-m1-cA_5h4s-a1-m2-cA
8 5h4s-a1-m1-cA 284 29 0.1183 0.0387 0.3793 4.0 5h4s-a1-m1-cA_5h4s-a1-m2-cA
9 4hmd-a1-m2-cA 528 35 0.1505 0.0265 0.4000 5.6 4hmd-a1-m1-cA_4hmd-a1-m2-cA
10 4hmd-a1-m1-cA 528 35 0.1505 0.0265 0.4000 5.6 4hmd-a1-m1-cA_4hmd-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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