Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=54)
KQEKTALNMARFIRSQTLTLLEKLNELDPDEQADICESLHDHADELYRSCLARF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1b6q-a1-m2-cA 56 54 1.0000 0.9643 1.0000 8.91e-35 1b6q-a1-m1-cA_1b6q-a1-m2-cA
2 1b6q-a1-m1-cA 56 54 1.0000 0.9643 1.0000 8.91e-35 1b6q-a1-m1-cA_1b6q-a1-m2-cA
3 1gmg-a2-m3-cB 54 54 1.0000 1.0000 1.0000 1.08e-34 1gmg-a2-m1-cB_1gmg-a2-m3-cB
4 1gmg-a2-m1-cB 54 54 1.0000 1.0000 1.0000 1.08e-34 1gmg-a2-m1-cB_1gmg-a2-m3-cB
5 1nkd-a1-m2-cA 59 56 0.9630 0.8814 0.9286 1.29e-30 1nkd-a1-m1-cA_1nkd-a1-m2-cA
6 1nkd-a1-m1-cA 59 56 0.9630 0.8814 0.9286 1.29e-30 1nkd-a1-m1-cA_1nkd-a1-m2-cA
7 1qx8-a1-m2-cB 51 54 0.9074 0.9608 0.9074 4.66e-28 1qx8-a1-m1-cA_1qx8-a1-m2-cB, 1qx8-a1-m1-cB_1qx8-a1-m2-cB
8 1qx8-a1-m1-cB 51 54 0.9074 0.9608 0.9074 4.66e-28 1qx8-a1-m1-cB_1qx8-a1-m2-cB
9 1f4n-a2-m2-cA 59 54 0.8148 0.7458 0.8148 1.70e-27 1f4n-a2-m2-cB_1f4n-a2-m2-cA
10 1qx8-a1-m1-cA 47 52 0.8704 1.0000 0.9038 2.45e-26 1qx8-a1-m1-cA_1qx8-a1-m2-cB
11 1f4n-a2-m2-cB 50 50 0.7407 0.8000 0.8000 3.34e-24 1f4n-a2-m1-cB_1f4n-a2-m2-cB, 1f4n-a2-m2-cB_1f4n-a2-m2-cA
12 1f4n-a2-m1-cB 50 50 0.7407 0.8000 0.8000 3.34e-24 1f4n-a2-m1-cB_1f4n-a2-m2-cB
13 3nr9-a2-m1-cB 347 35 0.2222 0.0346 0.3429 1.2 3nr9-a2-m1-cB_3nr9-a2-m3-cC
14 3nr9-a2-m3-cC 347 35 0.2222 0.0346 0.3429 1.2 3nr9-a2-m1-cB_3nr9-a2-m3-cC
15 4ras-a5-m2-cA 698 17 0.1667 0.0129 0.5294 2.9 4ras-a5-m1-cA_4ras-a5-m2-cA
16 4ras-a5-m1-cA 698 17 0.1667 0.0129 0.5294 2.9 4ras-a5-m1-cA_4ras-a5-m2-cA
17 2wi8-a1-m2-cA 283 45 0.2963 0.0565 0.3556 4.6 2wi8-a1-m1-cA_2wi8-a1-m2-cA
18 2wi8-a1-m1-cA 283 45 0.2963 0.0565 0.3556 4.6 2wi8-a1-m1-cA_2wi8-a1-m2-cA
19 1x31-a3-m3-cA 963 28 0.2222 0.0125 0.4286 6.0 1x31-a3-m1-cA_1x31-a3-m3-cA
20 1x31-a3-m1-cA 963 28 0.2222 0.0125 0.4286 6.0 1x31-a3-m1-cA_1x31-a3-m3-cA
21 1x31-a2-m2-cA 963 28 0.2222 0.0125 0.4286 6.0 1x31-a2-m1-cA_1x31-a2-m2-cA
22 1x31-a2-m1-cA 963 28 0.2222 0.0125 0.4286 6.0 1x31-a2-m1-cA_1x31-a2-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600