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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
KQGMVAVKEIKKYQKSTDLLIRKLPFSKLVRDIVTSGLSKSDIRFQGAAVEALQESAENY
IISLFVDTQLCAEHAKRVTIMKPDMELATRIGKRIEPEY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7d69-a1-m1-cE 99 99 1.0000 1.0000 1.0000 1.67e-69 7d69-a1-m1-cA_7d69-a1-m1-cE
2 7d69-a1-m1-cA 90 90 0.9091 1.0000 1.0000 2.98e-62 7d69-a1-m1-cA_7d69-a1-m1-cE
3 5ay8-a1-m1-cE 96 93 0.5354 0.5521 0.5699 2.86e-33 5ay8-a1-m1-cE_5ay8-a1-m1-cA
4 5ay8-a1-m1-cA 97 93 0.5354 0.5464 0.5699 3.63e-33 5ay8-a1-m1-cE_5ay8-a1-m1-cA
5 8f86-a1-m1-cE 95 95 0.5657 0.5895 0.5895 5.08e-33 8f86-a1-m1-cE_8f86-a1-m1-cA
6 8f86-a1-m1-cA 107 95 0.5657 0.5234 0.5895 7.93e-33 8f86-a1-m1-cE_8f86-a1-m1-cA
7 4jjn-a1-m1-cE 96 95 0.5657 0.5833 0.5895 1.99e-32 4jjn-a1-m1-cE_4jjn-a1-m1-cA
8 4jjn-a1-m1-cA 98 95 0.5657 0.5714 0.5895 2.08e-32 4jjn-a1-m1-cE_4jjn-a1-m1-cA
9 7z0o-a1-m1-cA 94 91 0.5455 0.5745 0.5934 2.09e-32 7z0o-a1-m1-cA_7z0o-a1-m1-cC
10 7z0o-a1-m1-cC 97 91 0.5455 0.5567 0.5934 2.63e-32 7z0o-a1-m1-cA_7z0o-a1-m1-cC
11 5zbx-a1-m1-cE 101 91 0.4848 0.4752 0.5275 4.85e-28 5zbx-a1-m1-cA_5zbx-a1-m1-cE
12 6uph-a1-m1-cA 93 88 0.4646 0.4946 0.5227 2.96e-27 6uph-a1-m1-cA_6uph-a1-m1-cE
13 5zbx-a1-m1-cA 95 91 0.4848 0.5053 0.5275 3.06e-27 5zbx-a1-m1-cA_5zbx-a1-m1-cE
14 6uph-a1-m1-cE 97 88 0.4646 0.4742 0.5227 4.26e-27 6uph-a1-m1-cA_6uph-a1-m1-cE
15 6kxv-a1-m1-cE 95 95 0.4848 0.5053 0.5053 2.15e-26 6kxv-a1-m1-cA_6kxv-a1-m1-cE
16 6kxv-a1-m1-cA 94 91 0.4646 0.4894 0.5055 2.90e-26 6kxv-a1-m1-cA_6kxv-a1-m1-cE
17 7y7i-a1-m1-cE 97 91 0.4242 0.4330 0.4615 4.33e-26 7y7i-a1-m1-cE_7y7i-a1-m1-cA
18 7y7i-a1-m1-cA 102 91 0.4242 0.4118 0.4615 6.06e-26 7y7i-a1-m1-cE_7y7i-a1-m1-cA
19 2yfw-a2-m1-cE 88 86 0.4242 0.4773 0.4884 6.32e-25 2yfw-a2-m1-cC_2yfw-a2-m1-cE
20 2yfw-a2-m1-cC 71 75 0.3535 0.4930 0.4667 3.65e-19 2yfw-a2-m1-cC_2yfw-a2-m1-cE
21 6xwt-a1-m1-cC 74 72 0.2727 0.3649 0.3750 2.01e-09 6xwt-a1-m1-cA_6xwt-a1-m1-cC
22 6xwt-a1-m1-cA 74 72 0.2727 0.3649 0.3750 2.01e-09 6xwt-a1-m1-cA_6xwt-a1-m1-cC
23 1taf-a2-m5-cA 68 47 0.1515 0.2206 0.3191 0.16 1taf-a2-m4-cA_1taf-a2-m5-cA
24 1taf-a2-m4-cA 68 47 0.1515 0.2206 0.3191 0.16 1taf-a2-m4-cA_1taf-a2-m5-cA
25 5z0q-a4-m1-cD 378 69 0.1717 0.0450 0.2464 0.49 5z0q-a4-m1-cD_5z0q-a4-m1-cG
26 5z0q-a4-m1-cG 379 69 0.1717 0.0449 0.2464 0.49 5z0q-a4-m1-cD_5z0q-a4-m1-cG
27 3gae-a1-m1-cB 253 54 0.1515 0.0593 0.2778 0.80 3gae-a1-m1-cA_3gae-a1-m1-cB
28 3gae-a1-m1-cA 253 54 0.1515 0.0593 0.2778 0.80 3gae-a1-m1-cA_3gae-a1-m1-cB
29 5tn2-a1-m1-cD 47 19 0.1111 0.2340 0.5789 0.86 5tn2-a1-m1-cC_5tn2-a1-m1-cD
30 5tn2-a1-m1-cC 47 19 0.1111 0.2340 0.5789 0.86 5tn2-a1-m1-cB_5tn2-a1-m1-cC, 5tn2-a1-m1-cC_5tn2-a1-m1-cD
31 5tn2-a1-m1-cB 47 19 0.1111 0.2340 0.5789 0.86 5tn2-a1-m1-cB_5tn2-a1-m1-cC
32 2yal-a1-m1-cA 39 19 0.1111 0.2821 0.5789 1.0 2yal-a1-m1-cB_2yal-a1-m1-cA
33 2yal-a1-m1-cB 38 19 0.1111 0.2895 0.5789 1.1 2yal-a1-m1-cB_2yal-a1-m1-cA
34 1b0n-a6-m3-cA 103 19 0.1111 0.1068 0.5789 2.7 1b0n-a6-m1-cA_1b0n-a6-m3-cA
35 1b0n-a6-m1-cA 103 19 0.1111 0.1068 0.5789 2.7 1b0n-a6-m1-cA_1b0n-a6-m3-cA
36 1b0n-a5-m2-cA 103 19 0.1111 0.1068 0.5789 2.7 1b0n-a5-m1-cA_1b0n-a5-m2-cA
37 1b0n-a5-m1-cA 103 19 0.1111 0.1068 0.5789 2.7 1b0n-a5-m1-cA_1b0n-a5-m2-cA
38 3t4e-a1-m1-cB 283 48 0.1414 0.0495 0.2917 4.0 3t4e-a1-m1-cA_3t4e-a1-m1-cB
39 3t4e-a1-m1-cA 283 48 0.1414 0.0495 0.2917 4.0 3t4e-a1-m1-cA_3t4e-a1-m1-cB
40 7da0-a1-m2-cB 95 34 0.1414 0.1474 0.4118 4.0 7da0-a1-m1-cB_7da0-a1-m2-cB
41 7da0-a1-m1-cB 95 34 0.1414 0.1474 0.4118 4.0 7da0-a1-m1-cB_7da0-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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