Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=46)
KQKAVFGIYMDKDLKTRLKVYCAKNNLQLTQAIEEAIKEYLQKRNG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2kel-a1-m1-cB 46 46 1.0000 1.0000 1.0000 4.99e-28 2kel-a1-m1-cA_2kel-a1-m1-cB
2 2kel-a1-m1-cA 46 46 1.0000 1.0000 1.0000 4.99e-28 2kel-a1-m1-cA_2kel-a1-m1-cB
3 3ft7-a1-m1-cA 45 40 0.2826 0.2889 0.3250 0.12 3ft7-a1-m1-cA_3ft7-a1-m1-cB
4 3ft7-a1-m1-cB 46 40 0.2826 0.2826 0.3250 0.13 3ft7-a1-m1-cA_3ft7-a1-m1-cB
5 2cax-a1-m1-cB 50 31 0.2174 0.2000 0.3226 1.2 2cax-a1-m1-cB_2cax-a1-m1-cA
6 2cax-a1-m1-cA 53 31 0.2174 0.1887 0.3226 1.4 2cax-a1-m1-cB_2cax-a1-m1-cA
7 2bnw-a1-m1-cC 53 31 0.2174 0.1887 0.3226 1.4 2bnw-a1-m1-cB_2bnw-a1-m1-cC
8 2bnw-a1-m1-cB 53 31 0.2174 0.1887 0.3226 1.4 2bnw-a1-m1-cB_2bnw-a1-m1-cC
9 6iya-a2-m1-cC 45 38 0.1957 0.2000 0.2368 8.9 6iya-a2-m1-cC_6iya-a2-m1-cD
10 6nal-a2-m4-cB 468 31 0.2174 0.0214 0.3226 9.1 6nal-a2-m3-cB_6nal-a2-m4-cB, 6nal-a2-m4-cB_6nal-a2-m2-cA
11 6nal-a2-m3-cB 468 31 0.2174 0.0214 0.3226 9.1 6nal-a2-m3-cB_6nal-a2-m4-cB
12 6nal-a2-m2-cA 469 31 0.2174 0.0213 0.3226 9.1 6nal-a2-m4-cB_6nal-a2-m2-cA
13 6iya-a2-m1-cD 48 38 0.1957 0.1875 0.2368 9.6 6iya-a2-m1-cC_6iya-a2-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600