Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
KQRIDLRLTDDDKSMIEEAAAISNQSVSQFMLNSASQRAAEVIEQHRRVILNEESWTRVM
DALSNPPSPGEKLKRAAKRLQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6ajm-a1-m1-cD 81 81 1.0000 1.0000 1.0000 1.20e-54 6ajm-a1-m1-cC_6ajm-a1-m1-cD, 6ajm-a1-m1-cF_6ajm-a1-m1-cD
2 6ajm-a1-m1-cC 81 81 1.0000 1.0000 1.0000 1.20e-54 6ajm-a1-m1-cC_6ajm-a1-m1-cD
3 6ajm-a1-m1-cF 66 66 0.8148 1.0000 1.0000 6.58e-43 6ajm-a1-m1-cF_6ajm-a1-m1-cD
4 6gto-a1-m2-cA 62 62 0.7654 1.0000 1.0000 1.89e-39 6gto-a1-m1-cA_6gto-a1-m2-cA
5 6gto-a1-m1-cA 62 62 0.7654 1.0000 1.0000 1.89e-39 6gto-a1-m1-cA_6gto-a1-m2-cA
6 1y9b-a2-m2-cA 79 76 0.3086 0.3165 0.3289 0.002 1y9b-a2-m4-cB_1y9b-a2-m2-cA
7 1y9b-a2-m1-cA 79 76 0.3086 0.3165 0.3289 0.002 1y9b-a2-m4-cB_1y9b-a2-m1-cA
8 1y9b-a1-m1-cA 79 76 0.3086 0.3165 0.3289 0.002 1y9b-a1-m1-cB_1y9b-a1-m1-cA
9 1y9b-a2-m4-cB 76 76 0.3086 0.3289 0.3289 0.002 1y9b-a2-m4-cB_1y9b-a2-m1-cA, 1y9b-a2-m4-cB_1y9b-a2-m2-cA
10 1y9b-a1-m1-cB 76 76 0.3086 0.3289 0.3289 0.002 1y9b-a1-m1-cB_1y9b-a1-m1-cA
11 7ak7-a1-m1-cC 87 75 0.2099 0.1954 0.2267 0.33 7ak7-a1-m1-cE_7ak7-a1-m1-cC, 7ak7-a1-m1-cF_7ak7-a1-m1-cC
12 3bem-a1-m1-cA 197 42 0.1852 0.0761 0.3571 0.84 3bem-a1-m1-cA_3bem-a1-m1-cB
13 7ak7-a1-m1-cE 71 70 0.1975 0.2254 0.2286 0.87 7ak7-a1-m1-cE_7ak7-a1-m1-cC, 7ak7-a1-m1-cE_7ak7-a1-m1-cF
14 3bem-a1-m1-cB 200 42 0.1852 0.0750 0.3571 0.91 3bem-a1-m1-cA_3bem-a1-m1-cB
15 7ak7-a1-m1-cF 73 70 0.1975 0.2192 0.2286 0.96 7ak7-a1-m1-cE_7ak7-a1-m1-cF, 7ak7-a1-m1-cF_7ak7-a1-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600