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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
KRETLNLRIKPAERDLIDRAAKARGKNRTDFVLEAARAAAEEALIEQRIIMADPEAYQEF
LVRLDQTPSPN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7ak7-a1-m1-cC 87 71 1.0000 0.8161 1.0000 1.11e-45 7ak7-a1-m1-cE_7ak7-a1-m1-cC, 7ak7-a1-m1-cF_7ak7-a1-m1-cC
2 7ak7-a1-m1-cE 71 71 1.0000 1.0000 1.0000 1.17e-45 7ak7-a1-m1-cE_7ak7-a1-m1-cC, 7ak7-a1-m1-cE_7ak7-a1-m1-cF
3 7ak7-a1-m1-cF 73 71 1.0000 0.9726 1.0000 1.17e-45 7ak7-a1-m1-cE_7ak7-a1-m1-cF, 7ak7-a1-m1-cF_7ak7-a1-m1-cC
4 7f37-a1-m1-cF 84 65 0.4225 0.3571 0.4615 4.04e-13 7f37-a1-m1-cF_7f37-a1-m1-cD
5 7f37-a1-m1-cD 85 65 0.4225 0.3529 0.4615 4.66e-13 7f37-a1-m1-cF_7f37-a1-m1-cD
6 6ajm-a1-m1-cD 81 70 0.2254 0.1975 0.2286 0.006 6ajm-a1-m1-cC_6ajm-a1-m1-cD, 6ajm-a1-m1-cF_6ajm-a1-m1-cD
7 6ajm-a1-m1-cC 81 70 0.2254 0.1975 0.2286 0.006 6ajm-a1-m1-cC_6ajm-a1-m1-cD
8 6ajm-a1-m1-cF 66 56 0.1690 0.1818 0.2143 0.64 6ajm-a1-m1-cF_6ajm-a1-m1-cD
9 4ldd-a1-m2-cA 137 39 0.1690 0.0876 0.3077 0.77 4ldd-a1-m1-cA_4ldd-a1-m2-cA
10 4ldd-a1-m1-cA 137 39 0.1690 0.0876 0.3077 0.77 4ldd-a1-m1-cA_4ldd-a1-m2-cA
11 6gto-a1-m2-cA 62 53 0.1690 0.1935 0.2264 0.84 6gto-a1-m1-cA_6gto-a1-m2-cA
12 6gto-a1-m1-cA 62 53 0.1690 0.1935 0.2264 0.84 6gto-a1-m1-cA_6gto-a1-m2-cA
13 4ldd-a1-m2-cC 139 27 0.1408 0.0719 0.3704 4.9 4ldd-a1-m2-cC_4ldd-a1-m2-cB
14 7vrd-a2-m1-cD 439 27 0.1690 0.0273 0.4444 5.1 7vrd-a2-m1-cC_7vrd-a2-m1-cD
15 7vrd-a2-m1-cC 439 27 0.1690 0.0273 0.4444 5.1 7vrd-a2-m1-cC_7vrd-a2-m1-cD
16 2xsx-a1-m1-cB 435 25 0.1268 0.0207 0.3600 6.9 2xsx-a1-m1-cA_2xsx-a1-m1-cB
17 2xsx-a1-m1-cA 434 25 0.1268 0.0207 0.3600 7.0 2xsx-a1-m1-cA_2xsx-a1-m1-cB
18 8bic-a1-m1-cA 318 26 0.1268 0.0283 0.3462 7.4 8bic-a1-m1-cA_8bic-a1-m1-cB
19 8bic-a1-m1-cB 323 26 0.1268 0.0279 0.3462 7.4 8bic-a1-m1-cA_8bic-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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