Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=53)
KREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5zko-a1-m1-cC 53 53 1.0000 1.0000 1.0000 1.69e-30 5zko-a1-m1-cA_5zko-a1-m1-cC
2 5zko-a1-m1-cA 53 53 1.0000 1.0000 1.0000 1.69e-30 5zko-a1-m1-cA_5zko-a1-m1-cC
3 6iak-a3-m1-cE 67 59 0.4151 0.3284 0.3729 2.36e-05 6iak-a3-m1-cE_6iak-a3-m1-cF
4 6iak-a3-m1-cF 71 59 0.4151 0.3099 0.3729 2.73e-05 6iak-a3-m1-cE_6iak-a3-m1-cF
5 6iak-a4-m2-cG 37 35 0.3208 0.4595 0.4857 9.77e-05 6iak-a4-m1-cG_6iak-a4-m2-cG
6 6iak-a4-m1-cG 37 35 0.3208 0.4595 0.4857 9.77e-05 6iak-a4-m1-cG_6iak-a4-m2-cG
7 2oqq-a2-m2-cB 42 28 0.2642 0.3333 0.5000 0.58 2oqq-a2-m1-cB_2oqq-a2-m2-cB, 2oqq-a2-m2-cA_2oqq-a2-m2-cB
8 2oqq-a2-m2-cA 42 28 0.2642 0.3333 0.5000 0.58 2oqq-a2-m1-cA_2oqq-a2-m2-cA, 2oqq-a2-m2-cA_2oqq-a2-m2-cB
9 2oqq-a2-m1-cB 42 28 0.2642 0.3333 0.5000 0.58 2oqq-a2-m1-cB_2oqq-a2-m2-cB
10 2oqq-a2-m1-cA 42 28 0.2642 0.3333 0.5000 0.58 2oqq-a2-m1-cA_2oqq-a2-m2-cA
11 4mxu-a1-m1-cB 301 40 0.2642 0.0465 0.3500 0.58 4mxu-a1-m1-cA_4mxu-a1-m1-cB
12 4mxu-a1-m1-cA 301 40 0.2642 0.0465 0.3500 0.58 4mxu-a1-m1-cA_4mxu-a1-m1-cB
13 5t01-a1-m1-cB 62 35 0.2830 0.2419 0.4286 0.68 5t01-a1-m1-cA_5t01-a1-m1-cB
14 5t01-a1-m1-cA 62 35 0.2830 0.2419 0.4286 0.68 5t01-a1-m1-cA_5t01-a1-m1-cB
15 4alp-a1-m4-cD 84 24 0.1887 0.1190 0.4167 7.8 4alp-a1-m4-cD_4alp-a1-m2-cB
16 1k3e-a2-m1-cA 141 25 0.2453 0.0922 0.5200 8.3 1k3e-a2-m1-cA_1k3e-a2-m2-cB
17 1k3e-a1-m1-cA 141 25 0.2453 0.0922 0.5200 8.3 1k3e-a1-m1-cA_1k3e-a1-m1-cB
18 3ulj-a3-m2-cA 87 24 0.1887 0.1149 0.4167 8.3 3ulj-a3-m2-cA_3ulj-a3-m2-cB
19 3ulj-a3-m1-cA 87 24 0.1887 0.1149 0.4167 8.3 3ulj-a3-m1-cA_3ulj-a3-m2-cB
20 4alp-a1-m2-cB 86 24 0.1887 0.1163 0.4167 8.4 4alp-a1-m4-cD_4alp-a1-m2-cB
21 3ulj-a3-m2-cB 89 24 0.1887 0.1124 0.4167 9.1 3ulj-a3-m1-cA_3ulj-a3-m2-cB, 3ulj-a3-m2-cA_3ulj-a3-m2-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600