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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
KRKFTIADASLERSPGQEADISVGNLGPITIGYGRYAPGQSLTETAVDDVIVLEGRLSVS
TDGETVTAGPGEIVYPKGETVTIRSHEEGALTAYVTYPH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3lwc-a1-m2-cA 99 99 1.0000 1.0000 1.0000 2.61e-67 3lwc-a1-m1-cA_3lwc-a1-m2-cA
2 3lwc-a1-m1-cA 99 99 1.0000 1.0000 1.0000 2.61e-67 3lwc-a1-m1-cA_3lwc-a1-m2-cA
3 4axo-a1-m1-cA 126 48 0.1919 0.1508 0.3958 0.007 4axo-a1-m1-cA_4axo-a1-m1-cB
4 4axo-a1-m1-cB 137 48 0.1919 0.1387 0.3958 0.007 4axo-a1-m1-cA_4axo-a1-m1-cB
5 2pyt-a1-m1-cA 122 34 0.1515 0.1230 0.4412 0.095 2pyt-a1-m1-cB_2pyt-a1-m1-cA
6 2pyt-a1-m1-cB 117 34 0.1515 0.1282 0.4412 0.097 2pyt-a1-m1-cB_2pyt-a1-m1-cA
7 3d82-a2-m2-cA 96 31 0.1212 0.1250 0.3871 0.14 3d82-a2-m1-cA_3d82-a2-m2-cA
8 3d82-a2-m1-cA 96 31 0.1212 0.1250 0.3871 0.14 3d82-a2-m1-cA_3d82-a2-m2-cA
9 8hfb-a1-m1-cB 311 38 0.1111 0.0354 0.2895 0.28 8hfb-a1-m1-cB_8hfb-a1-m1-cA
10 8hfb-a1-m1-cA 319 38 0.1111 0.0345 0.2895 0.29 8hfb-a1-m1-cB_8hfb-a1-m1-cA
11 6z42-a1-m1-cB 334 47 0.1818 0.0539 0.3830 1.8 6z42-a1-m1-cD_6z42-a1-m1-cB
12 6o2d-a1-m1-cB 142 48 0.1111 0.0775 0.2292 3.0 6o2d-a1-m1-cA_6o2d-a1-m1-cB
13 6o2d-a1-m1-cA 134 48 0.1111 0.0821 0.2292 3.1 6o2d-a1-m1-cA_6o2d-a1-m1-cB
14 2o18-a1-m1-cC 303 60 0.1818 0.0594 0.3000 4.1 2o18-a1-m1-cB_2o18-a1-m1-cC, 2o18-a1-m1-cD_2o18-a1-m1-cC
15 5upt-a1-m2-cA 504 32 0.1010 0.0198 0.3125 5.0 5upt-a1-m1-cA_5upt-a1-m2-cA
16 5upt-a1-m1-cA 504 32 0.1010 0.0198 0.3125 5.0 5upt-a1-m1-cA_5upt-a1-m2-cA
17 4e2g-a4-m1-cH 109 47 0.1616 0.1468 0.3404 5.9 4e2g-a4-m1-cG_4e2g-a4-m1-cH
18 4e2g-a4-m1-cG 109 47 0.1616 0.1468 0.3404 5.9 4e2g-a4-m1-cG_4e2g-a4-m1-cH
19 2o18-a1-m1-cD 296 57 0.1919 0.0642 0.3333 6.6 2o18-a1-m1-cD_2o18-a1-m1-cC
20 7x7d-a1-m1-cF 130 46 0.1414 0.1077 0.3043 7.7 7x7d-a1-m1-cC_7x7d-a1-m1-cF
21 7x7d-a1-m1-cC 130 46 0.1414 0.1077 0.3043 7.7 7x7d-a1-m1-cC_7x7d-a1-m1-cF
22 7pza-a1-m1-cB 226 42 0.1212 0.0531 0.2857 8.8 7pza-a1-m1-cA_7pza-a1-m1-cB
23 7pza-a1-m1-cA 225 42 0.1212 0.0533 0.2857 9.0 7pza-a1-m1-cA_7pza-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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