Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
KRKKYTLYLHPEKAADFQTLEAIESVPRSERGELFRNAFISGMALHQLDPRLPVLLTAIL
SEEFSADQVVTLLSQTTGWKPSQADIRAVL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2jd3-a1-m1-cB 90 90 1.0000 1.0000 1.0000 1.14e-62 2jd3-a1-m1-cA_2jd3-a1-m1-cB
2 2jd3-a1-m1-cA 90 90 1.0000 1.0000 1.0000 1.14e-62 2jd3-a1-m1-cA_2jd3-a1-m1-cB
3 7n7l-a1-m2-cA 297 60 0.2222 0.0673 0.3333 0.75 7n7l-a1-m1-cA_7n7l-a1-m2-cA
4 7n7l-a1-m1-cA 297 60 0.2222 0.0673 0.3333 0.75 7n7l-a1-m1-cA_7n7l-a1-m2-cA
5 7aa3-a1-m1-cA 550 35 0.1556 0.0255 0.4000 2.1 7aa3-a1-m1-cB_7aa3-a1-m1-cA
6 7aa3-a1-m1-cB 544 35 0.1556 0.0257 0.4000 2.2 7aa3-a1-m1-cB_7aa3-a1-m1-cA
7 2cca-a1-m1-cB 715 35 0.1556 0.0196 0.4000 2.5 2cca-a1-m1-cA_2cca-a1-m1-cB
8 2cca-a1-m1-cA 715 35 0.1556 0.0196 0.4000 2.5 2cca-a1-m1-cA_2cca-a1-m1-cB
9 5gha-a2-m1-cC 302 48 0.2111 0.0629 0.3958 6.0 5gha-a2-m1-cC_5gha-a2-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600